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Add some code refactoring from the blackboard branch

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This commit is contained in:
Eric Coissac
2024-08-02 12:35:46 +02:00
parent bc1aaaf7d9
commit 1b1cd41fd3
38 changed files with 491 additions and 330 deletions
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4
pkg/obitools/obicleandb/obicleandb.go
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@@ -274,11 +274,11 @@ func ICleanDB(itertator obiiter.IBioSequence) obiiter.IBioSequence {
// obioptions.CLIParallelWorkers(),
// )
references := annotated.Load()
source, references := annotated.Load()
mannwithney := MakeSequenceFamilyGenusWorker(references)
partof := obiiter.IBatchOver(references,
partof := obiiter.IBatchOver(source, references,
obioptions.CLIBatchSize())
// genera_iterator, err := obichunk.ISequenceChunk(