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remove the slice pool management

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This commit is contained in:
Eric Coissac
2024-09-24 16:31:30 +02:00
parent 2b4a633c30
commit 241f2286f2
17 changed files with 23 additions and 84 deletions
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4
pkg/obitools/obiconsensus/obiconsensus.go
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@@ -317,8 +317,6 @@ func MinionDenoise(graph *obigraph.Graph[*obiseq.BioSequence, Mutation],
}
pack.Recycle(false)
} else {
clean = obiseq.NewBioSequence(v.Id(), v.Sequence(), v.Definition())
clean.SetAttribute("obiconsensus_consensus", false)
@@ -403,7 +401,6 @@ func MinionClusterDenoise(graph *obigraph.Graph[*obiseq.BioSequence, Mutation],
clean = (*graph.Vertices)[i].Copy()
clean.SetAttribute("obiconsensus_consensus", false)
}
pack.Recycle(false)
clean.SetAttribute(sample_key, graph.Name)
@@ -436,7 +433,6 @@ func CLIOBIMinion(itertator obiiter.IBioSequence) obiiter.IBioSequence {
log.Infof("Sequence dataset of %d sequeences loaded\n", len(db))
samples := SeqBySamples(db, CLISampleAttribute())
db.Recycle(false)
log.Infof("Dataset composed of %d samples\n", len(samples))