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Big change iin the data model, and a first version of obiuniq

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Eric Coissac
2022-02-21 19:00:23 +01:00
parent 9737f97084
commit 2e7c1834b0
43 changed files with 664 additions and 440 deletions
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2
pkg/obiapat/pattern.go
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@@ -151,7 +151,7 @@ func (pattern ApatPattern) Print() {
// at the junction. To limit memory allocation, it is possible to provide
// an already allocated ApatSequence to recycle its allocated memory.
// The provided sequence is no more usable after the call.
func MakeApatSequence(sequence obiseq.BioSequence, circular bool, recycle ...ApatSequence) (ApatSequence, error) {
func MakeApatSequence(sequence *obiseq.BioSequence, circular bool, recycle ...ApatSequence) (ApatSequence, error) {
var errno C.int32_t
var errmsg *C.char
seqlen := sequence.Length()