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Big change iin the data model, and a first version of obiuniq

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This commit is contained in:
Eric Coissac
2022-02-21 19:00:23 +01:00
parent 9737f97084
commit 2e7c1834b0
43 changed files with 664 additions and 440 deletions
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4
pkg/obiseq/revcomp.go
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@@ -5,13 +5,13 @@ var __revcmp_dna__ = []byte(".TVGHEFCDIJMLKNOPQYSAABWXRZ#!][")
// Reverse complements a DNA sequence.
// If the inplace parametter is true, that operation is done in place.
func (sequence BioSequence) ReverseComplement(inplace bool) BioSequence {
func (sequence *BioSequence) ReverseComplement(inplace bool) *BioSequence {
if !inplace {
sequence = sequence.Copy()
}
s := sequence.sequence.sequence
s := sequence.sequence
for i, j := sequence.Length()-1, 0; i >= j; i-- {