Patch a bug on writing to stdout, and add clearer error on openning data files

This commit is contained in:
Eric Coissac
2024-08-13 09:45:28 +02:00
parent bdb96dda94
commit 31bfc88eb9
43 changed files with 1654 additions and 696 deletions
+1 -6
View File
@@ -5,7 +5,6 @@ import (
"fmt"
"os"
log "github.com/sirupsen/logrus"
"gopkg.in/yaml.v3"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obioptions"
@@ -39,11 +38,7 @@ func main() {
_, args := optionParser(os.Args)
fs, err := obiconvert.CLIReadBioSequences(args...)
if err != nil {
log.Errorf("Cannot open file (%v)", err)
os.Exit(1)
}
obiconvert.OpenSequenceDataErrorMessage(args, err)
summary := obisummary.ISummary(fs, obisummary.CLIMapSummary())