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Refactoring

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This commit is contained in:
Eric Coissac
2022-01-14 15:16:41 +01:00
parent 69c61bc190
commit 3848c54184
5 changed files with 10 additions and 10 deletions
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4
cmd/obitools/obipairing/main.go
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@@ -28,9 +28,9 @@ func main() {
// trace.Start(ftrace)
// defer trace.Stop()
option_parser := obioptions.GenerateOptionParser(obipairing.OptionSet)
optionParser := obioptions.GenerateOptionParser(obipairing.OptionSet)
option_parser(os.Args)
optionParser(os.Args)
pairs, _ := obipairing.IBatchPairedSequence()
paired := obipairing.IAssemblePESequencesBatch(pairs, 2, 50, 20, true)
written, _ := obiformats.WriteFastqBatchToStdout(paired)