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obidemerge: set demerge on sample the default

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This commit is contained in:
Eric Coissac
2025-01-10 17:09:44 +01:00
parent d066bb6878
commit 4ae3336135
3 changed files with 4 additions and 14 deletions
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10
pkg/obitools/obidemerge/demerge.go
View File

@@ -33,12 +33,6 @@ func MakeDemergeWorker(key string) obiseq.SeqWorker {
}
func CLIDemergeSequences(iterator obiiter.IBioSequence) obiiter.IBioSequence {
if CLIHasSlotToDemerge() {
worker := MakeDemergeWorker(CLIDemergeSlot())
return iterator.MakeIWorker(worker, false, obioptions.CLIParallelWorkers(), 0)
}
return iterator
worker := MakeDemergeWorker(CLIDemergeSlot())
return iterator.MakeIWorker(worker, false, obioptions.CLIParallelWorkers(), 0)
}

6
pkg/obitools/obidemerge/options.go
View File

@@ -5,7 +5,7 @@ import (
"github.com/DavidGamba/go-getoptions"
)
var _Demerge = ""
var _Demerge = "sample"
func DemergeOptionSet(options *getoptions.GetOpt) {
@@ -24,7 +24,3 @@ func OptionSet(options *getoptions.GetOpt) {
func CLIDemergeSlot() string {
return _Demerge
}
func CLIHasSlotToDemerge() bool {
return _Demerge != ""
}