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Patch for some lost of data during sequence writing

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This commit is contained in:
Eric Coissac
2023-02-08 13:14:26 +01:00
parent 4117cbdd08
commit 526bf79c7f
16 changed files with 99 additions and 10 deletions
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6
cmd/obitools/obirefidx/main.go
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@@ -3,6 +3,7 @@ package main
import (
"os"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiiter"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obitools/obiconvert"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obitools/obirefidx"
@@ -17,6 +18,7 @@ func main() {
fs, _ := obiconvert.ReadBioSequences(args...)
indexed := obirefidx.IndexReferenceDB(fs)
written, _ := obiconvert.WriteBioSequences(indexed, false)
written.Consume()
obiconvert.WriteBioSequences(indexed, true)
obiiter.WaitForLastPipe()
}