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Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.

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Eric Coissac committed 2025-03-25 16:44:46 +01:00
1 parent 2ab6f67d58
commit 5a3705b6bb
52 files changed
+151 -90
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pkg/obialign/locatepattern.go
+1 -1
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@@ -152,7 +152,7 @@ func LocatePattern(id string, pattern, sequence []byte) (int, int, int) {
}
// log.Warnf("from : %d to: %d error: %d match: %v",
// obilog.Warnf("from : %d to: %d error: %d match: %v",
// i, end+1, -buffer[buffIndex(len(sequence)-1, len(pattern)-1, width)],
// string(sequence[i:(end+1)]))
return i, end + 1, -buffer[buffIndex(len(sequence)-1, len(pattern)-1, width)]