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introduce obidefault

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This commit is contained in:
Eric Coissac
2025-01-27 17:12:45 +01:00
parent 0a567f621c
commit 7c4042df6b
69 changed files with 505 additions and 479 deletions
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4
pkg/obitools/obisplit/obisplit.go
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@@ -7,8 +7,8 @@ import (
log "github.com/sirupsen/logrus"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiapat"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obidefault"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiiter"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obioptions"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiseq"
)
@@ -295,7 +295,7 @@ func CLISlitPipeline() obiiter.Pipeable {
worker := SplitPatternWorker(CLIConfig())
annotator := obiseq.SeqToSliceWorker(worker, false)
f := obiiter.SliceWorkerPipe(annotator, false, obioptions.CLIParallelWorkers())
f := obiiter.SliceWorkerPipe(annotator, false, obidefault.ParallelWorkers())
return f
}