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Make sequence files recognized as a taxonomy

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This commit is contained in:
Eric Coissac
2025-03-14 14:22:22 +01:00
parent d1c31c54de
commit 8448783499
21 changed files with 657 additions and 467 deletions
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7
cmd/obitools/obitaxonomy/main.go
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@@ -115,7 +115,12 @@ func main() {
}
iterator = obitaxonomy.CLITaxonRestrictions(iterator)
obitaxonomy.CLICSVTaxaWriter(iterator, true)
if obitaxonomy.CLIAsNewick() {
obitaxonomy.CLINewickWriter(iterator, true)
} else {
obitaxonomy.CLICSVTaxaWriter(iterator, true)
}
obiutils.WaitForLastPipe()