obitools/obitools4
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Takes into account the option parsing errors

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Former-commit-id: d0b3ed0b96a72f79f887df8fbc325427e63d7a73
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coissac committed 2023-03-07 11:06:08 +07:00
1 parent 6b52dc0700
commit 9811e440b8
15 files changed
+23 -18
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cmd/obitools/obicsv/main.go
+9 -4
View File
@@ -1,16 +1,21 @@
package main
import (
"os"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiiter"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obioptions"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obitools/obicsv"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obitools/obiconvert"
)
func main() {
// optionParser := obioptions.GenerateOptionParser(obiconvert.OptionSet)
optionParser := obioptions.GenerateOptionParser(obicsv.OptionSet)
// _, args, _ := optionParser(os.Args)
_, args := optionParser(os.Args)
// fs, _ := obiconvert.ReadBioSequences(args...)
// //obicsv.CLIWriteCSV(fs, true)
fs, _ := obiconvert.CLIReadBioSequences(args...)
obicsv.CLIWriteCSV(fs, true)
obiiter.WaitForLastPipe()