obitools/obitools4
2
0 Fork 0
mirror of https://github.com/metabarcoding/obitools4.git synced 2026-11-10 01:24:41 +00:00
Code Issues Packages Projects Releases Wiki Activity

Refactoring of the default values

Browse Source
This commit is contained in:
Eric Coissac committed 2025-01-24 18:09:59 +01:00
1 parent 3137c1f841
commit 9acb4a85a8
50 files changed
+337 -166
Download Patch File Download Diff File Expand all files Collapse all files

No files matched your search

pkg/obiformats/csv_writer.go
+2 -2
View File
@@ -3,7 +3,7 @@ package obiformats
import (
"fmt"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obioptions"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obidefault"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiseq"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiutils"
)
@@ -54,7 +54,7 @@ func CSVSequenceRecord(sequence *obiseq.BioSequence, opt Options) []string {
l := sequence.Len()
q := sequence.Qualities()
ascii := make([]byte, l)
quality_shift := obioptions.OutputQualityShift()
quality_shift := obidefault.WriteQualitiesShift()
for j := 0; j < l; j++ {
ascii[j] = uint8(q[j]) + uint8(quality_shift)
}