obitools/obitools4
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Merge branch 'master' into taxonomy

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Eric Coissac committed 2024-12-20 20:06:57 +01:00
2 parents 5d0f996625 f2525d7b07
commit ccd3b06532
20 files changed
+286 -54
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pkg/obitools/obiconvert/sequence_reader.go
+2
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@@ -99,6 +99,8 @@ func CLIReadBioSequences(filenames ...string) (obiiter.IBioSequence, error) {
opts = append(opts, obiformats.OptionsFastSeqHeaderParser(obiformats.ParseGuessedFastSeqHeader))
}
opts = append(opts, obiformats.OptionsReadQualities(obioptions.CLIReadQualities()))
nworkers := obioptions.CLIReadParallelWorkers()
if nworkers < 2 {
nworkers = 2