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Make obitag able to use the taxonomic path included in reference database as taxonomy

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This commit is contained in:
Eric Coissac
2025-01-30 11:50:03 +01:00
parent 0df082da06
commit d3dac1b21f
3 changed files with 18 additions and 5 deletions
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2
pkg/obitools/obitag/options.go
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@@ -6,7 +6,6 @@ import (
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obidefault"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiformats"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiiter"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obioptions"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiseq"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obitools/obiconvert"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiutils"
@@ -43,7 +42,6 @@ func TagOptionSet(options *getoptions.GetOpt) {
// the obiuniq command
func OptionSet(options *getoptions.GetOpt) {
obiconvert.OptionSet(options)
obioptions.LoadTaxonomyOptionSet(options, true, false)
TagOptionSet(options)
}