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rename goutils to obiutils

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Former-commit-id: 2147f53db972bba571dfdae30c51b62d3e69cec5
This commit is contained in:
Eric Coissac
2023-03-24 10:25:12 +07:00
parent 42aae88520
commit d5e84ec676
33 changed files with 245 additions and 156 deletions
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4
pkg/obiformats/fastseq_write_fasta.go
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@@ -11,9 +11,9 @@ import (
log "github.com/sirupsen/logrus"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/goutils"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiiter"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiseq"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiutils"
)
func min(x, y int) int {
@@ -70,7 +70,7 @@ func WriteFasta(iterator obiiter.IBioSequence,
opt := MakeOptions(options)
iterator = iterator.Rebatch(10000)
file, _ = goutils.CompressStream(file, opt.CompressedFile(), opt.CloseFile())
file, _ = obiutils.CompressStream(file, opt.CompressedFile(), opt.CloseFile())
newIter := obiiter.MakeIBioSequence()