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Refactoring codes for removing buffer size options. An some other changes...

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Former-commit-id: 10b57cc1a27446ade3c444217341e9651e89cdce
This commit is contained in:
Eric Coissac
2023-03-07 11:12:13 +07:00
parent 9811e440b8
commit d88de15cdc
52 changed files with 1172 additions and 421 deletions
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pkg/obitools/obipairing/pairing.go
+1 -5
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@@ -211,17 +211,13 @@ func IAssemblePESequencesBatch(iterator obiiter.IBioSequence,
}
nworkers := obioptions.CLIMaxCPU() * 3 / 2
buffsize := iterator.BufferSize()
if len(sizes) > 0 {
nworkers = sizes[0]
}
if len(sizes) > 1 {
buffsize = sizes[1]
}
newIter := obiiter.MakeIBioSequence(buffsize)
newIter := obiiter.MakeIBioSequence()
newIter.Add(nworkers)