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Change the memory management for thee BuildAlignment function

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This commit is contained in:
Eric Coissac
2022-01-15 19:10:16 +01:00
parent e8fff6477b
commit e1b7e1761c
11 changed files with 145 additions and 1329 deletions
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4
pkg/obiseq/biosequence.go
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@@ -172,6 +172,10 @@ func (s BioSequence) WriteQualities(data []byte) (int, error) {
return s.sequence.qualities.Write(data)
}
func (s BioSequence) WriteByteQualities(data byte) error {
return s.sequence.qualities.WriteByte(data)
}
func (s BioSequence) Write(data []byte) (int, error) {
return s.sequence.sequence.Write(data)
}

2
pkg/obiseq/workers.go
View File

@@ -127,7 +127,7 @@ func (iterator IBioSequenceBatch) MakeISliceWorker(worker SeqSliceWorker, sizes
}
log.Println("Start of the batch slice workers")
for i := 0; i < nworkers - 1; i++ {
for i := 0; i < nworkers-1; i++ {
go f(iterator.Split())
}
go f(iterator)