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Refactor similarity engine and implement parallel clustering
Introduces parallel processing for clustering, refines scoring mechanisms, and expands test coverage for the alignment functionality. This change introduces parallel processing capabilities within the clustering logic, updates the core similarity engine with new data structures and scoring methods, and implements a comprehensive test suite for the alignment tool. It also adds new command-line options for configuring alignment parameters and reference lengths.
This commit is contained in:
Eric Coissac committed
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commit
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61 files changed
+13397
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+400
@@ -0,0 +1,400 @@
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GATTCAAATGACGGCAGC GATTCAAATGACGGCAGC 328.590295502325 328.590295502325 335.520082032693
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GCCGGGAGTCCCTGAGAG GCCGGGGGTCCCTTAGTG 335.202600908825 307.571309416976 317.582817372006
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CCGGAAATGTGCCATCTGCGTGCGA CCGGAAATGTGCCATCTGCGTGCGA 341.857354066828 341.857354066828 349.067971091170
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GCAGCGTAAGAGGAGGGC GCCGAGTGAGAGGACGGC 334.238236820572 292.689122005507 302.959373794547
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ATCGGGATCTCAAAACCATC ATCCGGATCCCAAAACTATC 328.374164082672 303.012377993885 311.743534784977
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TTTACTTCTCTCAAGGCC TTTACTTCGCTCACGGCC 324.870543621461 310.322643307651 318.434500513589
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GATATTATCCGG TTCCTCATTAGG 306.633848409535 131.298936687567 140.958918657051
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ACCAGATTCACCGTTAAA ACCAGATTCACCGTTAAA 324.666065281835 324.666065281835 331.625141334598
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GCAGAAGGAATTCGTCTTAAAGTTT GCAGAAGGAATTCGTCTTAAAGTTT 330.221644057193 330.221644057193 337.429293354313
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GTTACGCCCGTGGACAGA GTTACGCCCGTGGACAGA 333.152006826526 333.152006826526 340.131722535940
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TACTGGCCAAGTGTTTCGGGCTACC TACTGGACAAGGGTTTCGAGCTACC 338.543873371072 317.159669988483 326.737809053749
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CGGGCGAAAGACCTAACTCGTC GCCCATGTTTAAACGGTTCAAC 335.961664387167 99.726835837839 110.941608232133
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ACCACAGAAGAGCCTCAG ACCACAGAAGAGCCTCAG 329.675966490972 329.675966490972 336.774887202068
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TCCGTATCCGTGTGCTAT TCCGTATCCGTGTGCTAT 328.758681136274 328.758681136274 335.670742367360
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AGCACAACCATCTTGCCA AACCAGCAATTGGGCAAC 330.726812945211 0.000000000000 0.000000000000
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AAATCCGCGGTTACTTAG AAATCCCCGGATACTTAG 325.912290117405 310.432539561454 317.816914468819
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TGGTTGCGGAATGGCGACACGCTAG TGGTTGCGGAATGGCGACACGCTAG 341.368691736083 341.368691736083 348.576311955777
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CCACAAGGCACACCGAGGGCCCAAC CCACAAGGCACACCGAGGGCCCAAC 343.836245623632 343.836245623632 351.324029371624
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TACCTTTGGTTAACCGCG TACCTTTGGTTGACCGCG 328.806445188317 321.784293018138 329.972272766148
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ACCGCCAAACGGTAGTCCTT ACCGCCAAACGTTATTCCTT 334.638358155254 325.067933219113 333.495286023143
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GGAATCACCGAATTC GGAATCACCAAATTC 319.872552670165 310.456121372350 317.724729105623
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CGCTGGCGGGGACGCTTA CGCTGGCGGGGACGCTTA 338.850878426355 338.850878426355 345.870729715750
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CCCAGAACCGAGTGCTGA CCCAGAACCTAGTGCTGA 332.759551850704 324.515696448123 332.085468128098
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AGGACTATAGCC AGGACTATAGCC 311.340568942550 311.340568942550 317.961816433927
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AAGTAAGCCAAACTC AAGTAAGCCAAACTC 318.374897033808 318.374897033808 325.174916603994
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GGCAAACAGTGGCGTCTCTA GGCAAACATTGGCGTCTCGA 333.444435842161 322.587904260466 330.767259471616
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GCGGGCTGGGCGACGCCT GCGGGCTGGGCGACGCCT 344.353158968164 344.353158968164 351.458901919666
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AAAACCCGTTCTTGAGAA ATAACCCGTTCTTGAGAA 325.196643716015 318.373852240644 326.309549286768
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TCTACGGGCAGG TCTACGGGCAGG 320.684836039138 320.684836039138 327.333083788784
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CTGTATCATTCAAGACCTTGTG CTGGATCATTCATGACCTTCTA 327.587191928324 300.073898600295 309.615050320053
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GAGACCTCGTTTATATGTGCCG GAGATCTCCTTTATATGTTCCG 331.709967011022 307.489712436204 316.778347789381
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GATGCCATGCAACGCGGTCGAAATA GATGCCAAGCAACGCCGTCGAAATA 338.385858507321 328.510784583696 335.857144351146
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CACCCATGGGTCGAGGAA CCTTCATGGGTCAAGGAA 332.434732686040 303.559662982167 313.037414209458
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AACTTTACCACTTTGTCGGA AACTTTACCACTGTGTCGAA 327.854258269700 313.748415282978 322.159067997528
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CTCCCAAGAATAAGGCCA CTCCCAAGAATAAGGCTA 327.279305268693 315.945719545119 323.849648970559
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CTGCTCCCGACCTGCCGTTG CTGCTCCCGACCTGCAGTTG 339.148624544930 330.290260008245 337.867535931326
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TTAGGAGACTCTTCAGCCTCCTTGT TTAGGACACTATTAAGCCTCCTTGT 334.398890499698 315.037835993209 323.891875192977
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TGGACGATTGCG AGAATTGCGGCC 320.244905957781 146.501396490593 156.665817684297
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ATTGTCAACTGTAGGTCA ATTGTCTAGTGTAGGTCA 323.939323737395 300.681567922172 308.863167608541
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ACAATGTATTTTCTCGGG ACAATGTATTTTCTCGGG 323.362512238862 323.362512238862 330.327169046076
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CGTGTGAGTGGCCCGAGTTGTCTCT CGTGCGAGTGGCCCGAGTTGTCTTT 340.130848609675 332.245514068114 340.636316881815
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TATCAGACGTGGCAATGC TATCAGACTTGACAATGT 328.992885301719 304.405743905969 312.701350705029
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CGTCGTCCCTCTCAGCCG CGTCGTCCCTCTCAGCCG 336.200821936899 336.200821936899 343.186897048375
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TAAGGCTAGCCAGAACCACG TGAGGCTAGCCAGAACCACG 332.598253740841 326.985556902569 335.280653989150
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GTTCAGGGGAATGAGAGATA TTACAACTGCCAACTTCGCT 326.722966616537 109.952678878773 121.594862151643
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CCCAGCGCGAATTTGTCA CCCATCGCGAACTCGGCC 332.540722470730 292.630570524742 303.511783076339
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TGTCGTCGCTACCAGTTA TGCCTTCCCTACCAGTTA 328.953316297354 307.160700342629 315.442693299698
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CATGCACCGTGAGTCTGC CGTTCACCGGGAGTCCGC 332.846939286468 291.434652139556 302.526073291148
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GAGAGTTGCTGTTGATTA TAGAGTTGCTGTTGATTA 323.031379731052 319.294880722061 326.526947280607
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GCTCGGTCCTACGCCGACGT GCCTGATCTAAATATGCCTG 339.747877109584 158.568208002892 173.058219990461
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TCTTTGAGCTTCCCATCT TATTTGAGGTTCCCATCT 326.307771557426 300.329179385918 308.617669678883
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GTTTCCTCGGGT ATGTCCCCGGTC 317.903207078845 250.921863687541 262.030341678318
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AGTCTGCATCCAGGATAGTGTTCAA AGTCTGCGTCCAGGATAGTGTTCAA 333.474575396610 328.822975749317 336.887405627890
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CTAGGGCACCAACGCACG CTAGGTCACCAACGCACG 335.143347846422 329.701891848980 337.431099508189
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GATTGCTGGACCCGACAAAC ATCGACTGCGTCAATCTGAT 332.811424650986 125.989102558259 139.175967010614
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TTATTTCTCCGAGATCCA TTATTGCTCCGGGATCGA 323.096708880271 281.710374029821 291.583720089868
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AACCTCCGCTCAGCCCAT AACCTCCGCTCAGCCCAT 334.559812073966 334.559812073966 341.720616471431
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ACATGCGGAGACGATAGA GAGCATCTTCGTGTCCCC 328.777637355840 13.663795446228 15.557079997899
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GCGATCCGGCCCGAAGGACGGTTAC GCGATCCGGCCCGAAGGACGGTTAC 343.160858693872 343.160858693872 350.466895660629
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TAGGCGCTACCAAAGAGACC TACGCGATACCAAAGAGACC 332.314713425979 316.910949741281 324.757961637335
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GCTTGACGGAGGGATTGCATACGTC GCTTGACGGAGGGCTTGCATAGGTC 337.905459739261 327.298908614928 335.399197844049
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CTTACGGTTTTGTGG CTTACGGTTTTGTGG 320.490499863910 320.490499863910 327.265086426630
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AGAATGCTTTGCACGGGAAAAAGAC AGAATGCTTTGCCCGGGAACAACAC 334.833702111547 324.032364174889 333.126901145695
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CCATCCGGGACCGTGTTA GTGGTGGACAGAAAGCAC 332.523437582445 67.486926898379 75.000548050396
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AGCAAATATTTAAAACTG AGCAAATATTTAAAACTG 316.766614411011 316.766614411011 323.642414073658
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ACTGACAAAAGGGACCTTTAGA CCCGAACAAAGGGACCTTGAGG 329.363491007070 296.438968024933 307.489562539207
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ATAGGACTCGGACGAAAG ATAGGACTCGGACGAAAG 326.913461392949 326.913461392949 333.867158802657
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TATAAGCTAGTTGAG TACCAGCTACTCGAG 312.936278497921 279.566780789215 288.458312256098
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AAAGCTGCCGTG GTCGATTGTCGG 320.846677260689 11.139130534401 12.281612095844
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AAAACTGGCACG AAAACTGGCACG 317.241607884236 317.241607884236 323.710646130150
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ATTCAGATAATGAAGGAC ATTAAGATAATGAACGAC 319.569864618292 300.532814450507 308.266203286509
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ACTCCGCCAGTAAAGAGCGATC ACGCCGCCAGTAAAGATCGATC 334.956435857922 324.130818124085 332.402089448274
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AAACAGGTGGTGCTTCTGGT AAGCAGGTGGCGCTTCCGGT 332.663618849926 317.895372912569 326.451852134041
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ACGTAAACTAGCGATCCTAC ACGCAAAACAGCGATCCTTC 327.648394671924 306.841804464239 316.109126582555
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ACTCTTCTGTAGTAATTT ACTCTTCTGTATTAATTT 318.111014934586 311.385476013207 318.854355601485
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GCCTGGATGAAA CCTCGCATTATA 314.875733564946 135.466989302349 145.485320466877
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ACAAACATCTTT ATAATTATCTTT 306.751127645023 230.133355279539 240.007445742650
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TTTATGTTGCACCCG GCCCTCCTGCAAGGG 322.725425600228 198.227797952416 210.186099128768
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CTCTGTGATTGC CTCTGTGATTAC 313.233837007613 299.818390981614 306.829729109027
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CAGGGGGTGTCTTCTTGCCA CACGGGGTGCCTTCTTACTA 335.170765818115 304.025892909583 313.686365730924
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ATAAACTTAAGCGGGGCT ATAAACTTAAGCGGGGCT 327.141275752020 327.141275752020 334.197558650535
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GTGGTACGTCTCGCACCGTATT GTGGTACGTCTCGCACCGTGTT 335.183465966560 331.876024565197 339.826055532683
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AGCCCCTACCGTGAGGTATGAA AGCCCCTACCGTGAGCAATGAA 334.930026765640 329.325029384246 337.230038559345
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CTACGTTTGGACTTTCAG TCCAATTCATGTACACCA 324.309529994597 130.265141330095 141.767454087853
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GGAGGCGTCGTCTAATGTGGCTGCA GGAGGCGTCGTCTAATGTGGCTGCA 340.715437268799 340.715437268799 347.974364433377
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TCACGCCCGTTACCATGC TCGCGCCAGTTACCATTC 334.223290685080 301.060585660525 310.242722525263
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GTGTGGAATAAC GTGTGGAACAAT 308.856970626568 289.055396946314 297.087438077958
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AACTAGGCACAGCGGAAGTGTTACA AACTACGCACAGCGGAATGGTTACA 336.064499532413 324.487528333723 332.510759640255
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AGTTGGGACCGCGGACCTCAGACGA ACTTGGGACCGCGGACCTCAGACGA 342.586917960981 339.716507068413 347.297152857653
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CGCAGGCCGCCCTATCCG GTGGGCAACCGTGATTAT 339.659476639126 111.730621568890 122.520566332669
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ACTCGGTTAAAGAAGTAGCGGG ACTCGGTTAAAGAAGTAGCGGG 332.661444291378 332.661444291378 339.831677127033
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GTCGCACTCACGCCAAGG GGCGCACTCACGCCAAGG 335.434179979611 327.968420416066 335.946784667129
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TTATGTGCCGTC TTATGTGCCGTC 315.550568136423 315.550568136423 321.978396903837
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ATACACTCCCTC ATACACTCCCTC 311.742937528520 311.742937528520 318.358302050000
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ATATATAAAACGCTT ATATATAAAACGCTT 310.835103721529 310.835103721529 317.439661067059
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TTGACCCAGCTCTGACAA TTGACCCAGCTCTGACCA 329.300611062468 323.357283025809 331.214889354503
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TCACCAAGGACATCGGTGAA CACTAATCTCTAGGCTACTG 331.893316827967 0.000000000000 0.000000000000
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AAATACTAATATCACGAGGCCT AAATACTAATATCACGAGGCCT 326.991443235419 326.991443235419 334.132256945596
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CATCTAAGGTTCCCCACG CTCCTAAGGTTCCCCCTA 328.386823878643 301.442125171364 311.286145433228
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TCAGGCAAGGCTAAAGAT TCATGCAAGGCTGAACCT 326.725811212726 296.261200224359 306.662120559413
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ACCGGTGTCTGACGAAGA CCCGGAGTCTGACGAAGA 331.461574428762 323.233483550268 330.841087730303
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TGCCATAACAGT TGCCATAACAGT 313.107834134787 313.107834134787 319.615154304331
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ATAACTCTGCTCTATAAA ATAACTCTGCTCTATAAA 317.633729090723 317.633729090723 324.531712635958
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TCCTGCGCAAATTACTAGAACCTAA GTCTCAGCGAGAACTCTATTAGGAT 332.050504643625 0.000000000000 0.000000000000
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GTATCGAGGTCGAGGAAAGCGCTGT GTATCAAGGTCGAGGAAAGCGCTGT 338.362288220608 334.066037941649 341.579718818818
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CAGCCTTTCAGG CAGACTTTCAGG 316.248469201820 292.111362062705 300.080584403201
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CTTGCGGTACATCGCAGTGTGAATA CTTGCGGTACATCGCAGTGTGAATA 335.474585471307 335.474585471307 342.613324305508
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TAAGAACTAGCACGCATAAG TTAGAACCAGTACGAAGAAT 326.081723019865 254.023237958651 266.323327012842
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TACATGTACATTTCGGCC TACATGTACATTTCGGCC 325.896662787897 325.896662787897 332.832044747960
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TAGCATGCGATTCCCTAAGAAG TATCATGCGATTCCCTAGGAAG 330.590797080638 318.020175239024 326.375059746915
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CGGTGTTGTACGCCGACC CAGTGGTGTATGGAGTCC 335.122388615945 245.504228310044 257.618564855382
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ACTTTACGCCCGTAG ACTTTACGCCCGTAG 324.104530886916 324.104530886916 330.841602836160
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GGTCTTGGTGGACAGATG AGTCTTGGTGTACAGATC 328.628141921468 313.674320134018 322.206848229767
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GTTCGGTCATGC GTTCGGTCATGC 317.988264837295 317.988264837295 324.445499068321
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CTCACGCTTCTCATTATT CTCACGCTTCTTTTTATT 323.247552234877 309.106689004420 317.389249379550
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TGCGAGCGTGAT TGTGAGCGTGAT 322.408515345848 302.521839005369 309.729023044907
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AGATAGGGGGCCCTCGAACCGCCCG AGATAGGGGGCCCTCGAACCGCCCG 345.102909485864 345.102909485864 352.627470314597
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AACCTACACAGG AACCTACACAGG 313.161040203465 313.161040203465 319.768122899840
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TCCGCCCGCCAC TCCGCCCGCCTC 330.719187584648 320.094784422350 327.317364425992
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ATATCGTGAGCCGTGTACCCGG ATAGCGCGATCCGTATACCCGC 336.660788072052 313.231213020956 322.468970039473
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GGAAGCGTTGACACCGAC GGAAGCGTTGACACCGAC 332.770993213501 332.770993213501 339.705211527389
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CGAGGCAAGGGATACGCAGCTCAGT CGAGACAAGGGATACGCAGCTCACT 340.305756168638 332.795008096728 340.846081667398
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CTACCGGCGTAGATATGC CTACCGGCGTAGATGGGA 328.520812530739 311.151850739834 319.645074203379
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GACTTAAGCGACTAC ACGGCTTAGCGTGGC 318.887440179040 10.664421060955 12.014569510602
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CTTAGGATTCTGGCTAATTTACGGT CTTAGGTTTCTGGCTAATTTACGGT 330.595304320228 326.378730172844 334.038450345878
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ATCCGCACGGAC TTACCGGACCCC 323.089768931227 0.000000000000 0.000000000000
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TCCCAGCTTTTGCAGTGGGATT TCCTAGCTTTTGCAGTGGGATC 335.062847253676 324.545742095465 332.720886054794
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TGGCTTCACGGC TGGCTTCACGGC 323.785812253507 323.785812253507 330.353929757972
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TAGGTTATTCCGACCATA ATGCGGGACACTGCCATG 322.422210409371 192.368508212637 205.559476403263
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AGCCTTTCGACTGAC AGCCTTTCGATTGAC 324.335884950598 312.595672426393 320.534233002808
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||||
CGTGCAGCTTTCATG CGTGCAGCGTTCTTG 324.919682340793 305.582789800617 313.597104921942
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||||
TCTACGTGGCGGGGACCGGG TCTACGCGGCTGTGAGCCGG 341.347076387025 299.430239048585 309.018341106927
|
||||
TCAAATTAAAGTTGGACTGACA TCAAATTAAAGTTGGACTGACA 326.350254889911 326.350254889911 333.467128526408
|
||||
CGGGGGCCGTGGTCACTGCTTTCAG CGGGAGCCCTGGTCACTGTTTTGAG 343.571008380319 318.537337281338 328.795128334431
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ACATTGCAGTCA TACAAATATGCA 314.282094430945 54.422588938214 59.864081596928
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||||
GTTCCATAAGACTTA GTTCCATATGATTTA 313.492331047121 283.603344310509 292.314146114969
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||||
TATTTGAAAGACATAGGGGCGT CGGTACACTGGTGCCGGAGGCA 329.927702442206 21.671006660567 25.185742081802
|
||||
AATGGCAATTGCGTA AATGGCAATTGCGTA 322.153531008784 322.153531008784 328.861389966064
|
||||
TGACCTCACAAATACGGGGTCG TGACCTCACAAATAAGGGGTCG 334.840837473162 327.359477549248 335.051513807130
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||||
CTCTGAAAGAACCGGGCA CTTTGAAAGAACCGGGCA 330.717616406698 321.166071332522 329.380562417680
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||||
TCCCCGATGCTTAAGACACGCGTGT TTCCCAAGGCTTAATACACTCGTGT 339.959965745411 305.790225053607 316.153725711522
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TGCACTTCGAGG TGCACTTCGAGG 318.856723935199 318.856723935199 325.349637181717
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AAGGGTCACCAGAAA AATAAGGTTCCTGCT 322.240165848681 53.802401211576 60.076587053449
|
||||
TAATAAGTCGTG TTATAAGTGTTG 306.473400984667 233.666269447857 244.153793035378
|
||||
CATGATGCCTAGTATGAT CATGATGCCTAGTAAGAT 321.893431646493 315.240330549201 322.344428969018
|
||||
TATGCGCGAACCTAC TATGCGCGAACCTCC 324.777133033446 320.584177151486 328.154789861490
|
||||
TGGCAACTCCCGCACATGCCCT TAGCAACTCCCGCCCCTGCCCT 341.428702525130 330.240007837364 339.446160220950
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||||
AACGGTCCATAGTGT TTACTGCCTCTATCA 322.301936674505 92.184229884404 101.375195399772
|
||||
CTGGTTAGCGACTAGGGCGA CTGGTTAGCGACCAGGACGA 334.491616458730 325.265096818567 333.491322070668
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||||
CTACGTGACATGGCCCCT CTACGTGACATGGCCCCT 332.520578697054 332.520578697054 339.639446777780
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||||
CCCTCCTGGAAGAATCCATAGTATC TCCTCCTGGAAGAATGCATAGTATA 331.837538166233 315.597835592823 324.711900293230
|
||||
TCCGCGGTGCGGCGTCTA TCCGCGGTGCGGCGTCTA 340.070741817013 340.070741817013 346.961988197618
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||||
TGAGGGCGGCTCGAAAGAGATAGGC TGAAGGCGGCTCGAAAGAGATAGGC 339.908445380864 335.397387022299 343.087954453266
|
||||
AGGATTGAATGCGGATTCACAATGA AGGATTGAATGCGGATTCACCATGA 333.075743741665 329.267518388258 337.096639984117
|
||||
CTGGCACGTGAAAGTGTA CTGGCACGTGAAAGTGTA 328.758681136274 328.758681136274 335.670742367360
|
||||
TATGAGCTCGCATTGACGAT TATCAGCTCGCATTGACGTT 330.199735252295 317.575655447674 325.732088199432
|
||||
CTCCGATACGCCCAACGTTCCT CTCATATACGCCCAACGATCCT 337.111273784768 319.264148345607 327.480755860446
|
||||
CTTGTAAGGAACCGATCGTGAAACT ATAAGATATATTTGTTAAATAGGAG 333.190199559369 0.000000000000 0.000000000000
|
||||
CGATCGGGGTTCGGTGCTAAGG CGATCGGGGTTCGGTGCTAAGG 337.958135639451 337.958135639451 345.185613424927
|
||||
GTGTCACTTAGTGGC GTGTCACTTAGGGGC 322.599730343108 309.940994981687 317.650231320028
|
||||
GTAAGGTGCTACGTGGGA GTAAGGTGGTACGTGGGA 329.791738219571 317.210999985374 324.885748886244
|
||||
GGGGACCACGGAGCGCTT GGACACCACGGAGCGCTT 338.493908487715 328.075398097466 336.508505160201
|
||||
ATGATTCGGCTGATGTTG ATAATCCGACTGACGTTA 326.617373214063 284.388619463998 294.654772560060
|
||||
CGTTGCACCTGTGCAGAC GGATGGACCTGTGGAAAC 333.382064119484 257.494983943418 268.960440677818
|
||||
GGGTATGGAACCGAGCTT GGGTATGGAACCGAGCTT 330.144774353530 330.144774353530 337.264117120300
|
||||
CCGTTTAGTACTTGAGCT TCGTTTAGTTATTGAGCT 325.101412938739 306.110310829587 314.815405000962
|
||||
TGCTCGCCGTTGATG TGCTCGCCGTTGATG 328.982207099090 328.982207099090 335.675432532816
|
||||
GCGGTATCCTGTTTAATAGCAC GCGGTATCCTGTTTAATAGCAC 330.022926941214 330.022926941214 337.146106169306
|
||||
ATTGCGTTGCCCAACGGGAAAC CTTCTAGATCTCGTGTTCTGTC 337.501498070251 30.100236916645 34.669973146917
|
||||
GAAGCGTACTAC TAATCGTACTAC 312.135520730872 290.578334792837 298.230744679790
|
||||
TCGCTTAAGTTGGACCCG TCGCTTAAGTTGGACCCG 330.825518413055 330.825518413055 337.820664158968
|
||||
TCAAAATATCGACGATCGGGTA TCAAAATATCGACTATCGGGAA 329.618484688871 316.847687836049 324.679351875168
|
||||
CTGTAAGTGCGT CTGTAAATGCTT 315.552108712421 284.478519286229 292.079870838245
|
||||
ATCCGTTGTCTGTAT TCCTATCTTGTCTCA 319.236231890115 0.000000000000 0.000000000000
|
||||
GCTGACGATCACCACTGAGT GCTGACGATCACCACTGAGT 332.887137941413 332.887137941413 339.934427106782
|
||||
GGGACCGTCTTGCCTGAA GGGACCGTCTTGCCTGAA 333.069804290103 333.069804290103 340.197004324922
|
||||
GACACTTCATGTTGAAGGAA GAGACATCAGGCTGAAGGAA 326.623921634303 290.160218586875 299.116365655134
|
||||
AAAGTTAATACT AAAGTTAATGGC 300.439776727757 274.074904518474 281.916563483524
|
||||
TTCACTCAGGCCGGGACT TTCACTCAGGCCGGGACT 333.775772265987 333.775772265987 340.923230531829
|
||||
TGAGGTGTACCTTCGATAACCCCTG TGAGGTGTACCTTCGATAACCCCTG 335.429777164410 335.429777164410 342.806589346267
|
||||
GGCGTTAGACTGGGACTCAT GGCGTTAGACTGGGACTCAT 332.314063072189 332.314063072189 339.465122151725
|
||||
GCGGAAAATTCCTCCTGGAGGC GCGGAAAATTCCTCCTGGAGGC 336.555274112350 336.555274112350 343.900546225317
|
||||
ACCCGCCGGGTTATG AACCGCCTGGTTATG 330.420331626846 303.591907390707 312.104888476139
|
||||
GTGAATCTGTGCCATGTAAGGAGTA GTGAATCTGTGCCATGTAAGGAGTA 332.502726598592 332.502726598592 339.772881635043
|
||||
TGTGCATATGCGAAGCAGCA TCTGCATATCCGAATCAGAA 333.922832979848 300.308875168811 310.038091502733
|
||||
TTCCGGGAGAGTCATTCAAGCGATT AAGCGAGGGGAGACCCTTCTTTACG 335.964252182230 0.000000000000 0.000000000000
|
||||
TATCACTTACTCCCCGGA TATCACTTACTCCCCGGA 327.110291836484 327.110291836484 334.201971889462
|
||||
ACGCATTAGTCTACCGTCTTGC ACGCATAAGTCTACCGTCATGC 333.304407097527 323.852674403909 331.529871399707
|
||||
ATAATAGATGAT ATAATAGATGAT 298.724754718266 298.724754718266 305.105559067848
|
||||
ACTTCATTGGCCTCTTTC GGGATAGGCCATTAGAAA 325.919067175754 0.000000000000 0.000000000000
|
||||
ATTTGCGTTAAGGAGACTCA ATTTGCGTTAAGGAGACTCA 327.736465255252 327.736465255252 334.763124999138
|
||||
GGGAGCCACGTCCCGCACTT TGGGTCTGTTCTACGGGTCC 340.351804998615 66.406913767236 75.840004728444
|
||||
AATGGTAGCTTGGAACAACT AATGGTATCTTGGAACAACG 327.871691250641 318.316542767859 326.227958663349
|
||||
ATACAATACCAA GTAAAACCCTAA 304.232095602747 144.099149360347 153.765346779177
|
||||
TTCTAGCGTCCCGGTACT TTCTAGCGTCCCGGTACT 330.589206350792 330.589206350792 337.589326383339
|
||||
TGGCCTTTTTTTAAGTAAAT TGGCCTTTTTTTAAGTAAAT 321.872839855264 321.872839855264 328.960538235470
|
||||
ATGCCTCCTTGTAATACAGCTAGGG ATGCCTCCTTGTAATACAGCTAGGG 333.823387389837 333.823387389837 341.214372867702
|
||||
GAGATAACACGCCAGGTTAA GGGATAACACGTCAGGTTAA 328.361333311021 307.593342393239 316.302295915689
|
||||
CACGGGCATCAAATG CACGGGCATCAAATG 324.403592056034 324.403592056034 331.200512200928
|
||||
TTAACTGTCGGTACTCTT TTAACTGTTGTTATTCTT 323.363845103162 280.866882856653 291.385325188001
|
||||
CACGATAGTCGTTGA TTCAAAGGTGAGTAA 321.130711058809 128.711478226556 138.526211474293
|
||||
GCCGGCCTAAGGACG GCCGGCCTAAGGACG 331.645745178000 331.645745178000 338.559056448220
|
||||
ACGCAAAAAGCGCAT ACGCACAAAGCGCAT 327.022026932331 320.836952659324 328.322467858379
|
||||
AGTCTTAAACGTTTATTG AGTCTTAATCGTTTATCG 318.625758737664 304.665747911265 312.350081264934
|
||||
CTGATCCGAGTTTGGCAGCT CTGAACCGAGTTTGGCAGCC 333.515248215999 325.848131196554 333.400292317441
|
||||
AATCCCCCTGCGCGGTGG AATCTCCCATCGCGGTGG 338.914827359853 316.871536337894 325.825478445471
|
||||
CCTATTGCGAGTGGAGTTTTTC CCTATTGCGAGTGGAGTTTTTC 330.398722345826 330.398722345826 337.555411082006
|
||||
TTTGTAGCACTCTCTAAG TTGGCACCGCTCTCGAGG 321.958335092061 240.192027201542 251.110839474907
|
||||
TATAAATCCAAACCG TATAAATCCAAACCG 314.941565560136 314.941565560136 321.679961211234
|
||||
TCTGGTCTACGGACCAGA TCAGGAATGCGGACCAGA 329.776739773812 300.216331414806 308.948988559444
|
||||
GCGATTCTGGAAATT GCGATTCTGGAAATT 319.582046008775 319.582046008775 326.323905265890
|
||||
AACTTATTGTAAGTGGCT ATCTTATTGTAAGTGGCT 321.893436025311 314.515961362535 321.963655827352
|
||||
AGTAGATCCACGCTC GGTGACGGTATAAGT 322.922652409125 0.000000000000 0.000000000000
|
||||
AGACAGCCAATTTGGACC AGACAGCCAATTTGGACC 328.624785345222 328.624785345222 335.740638937702
|
||||
TCTCCCCATCTGGTTGTGACAC CCTCCCCAACTGGCTGTGACAC 334.475047649994 322.522934177182 331.074093710435
|
||||
GTCCGGAGGGAAATT GTCCGGAGGGAAATT 323.695895292588 323.695895292588 330.657945722303
|
||||
GCATTGGTGTCTGAGAGACATC GCATTGGTGTCTGAGAGACATC 331.823924496399 331.823924496399 338.987388491055
|
||||
TACTCTTCGTTG TACTCTTCGTTG 310.392977904224 310.392977904224 316.757886088883
|
||||
ACCTACTACAAT ACCTACTACAAT 306.714175636802 306.714175636802 313.206330066357
|
||||
CCTTACACTATGCACCCG CCTTACACTATGCACCCG 328.839039592404 328.839039592404 335.870639509527
|
||||
ACCTGTAAGATCGAGTGATATCGGA ACCTGTAATATCGAGTGATATTGGC 332.453410863819 317.742424213661 326.757759926067
|
||||
ACCCGGAATCAC ACCCGGAATCCC 318.062682068531 309.456479129025 317.168301011525
|
||||
TTGCATCTAAACATTAAAGCAGAAG TTATGAGCCTTCCTAATCCCGCAGC 328.558653084235 92.581987798659 103.905955829058
|
||||
CCGCGCCAATAT ATCACAAAGGAA 320.315607213397 0.000000000000 0.000000000000
|
||||
ACCAGCCTAACTTTTGTT GCCAGCCTAACTGTTTTT 325.132735655685 301.134269729448 310.106656597025
|
||||
GCTTAATGCTGGCTACGC GCTTAATGCTGGCTATGC 330.692022417212 320.449633481302 328.448263187090
|
||||
TGGTCCGAACGGCAACAC TGGTCCGAACGGCAACAC 334.376696093757 334.376696093757 341.354168304032
|
||||
ACCCGGCCAGGG ACCCGGCCAGGG 328.950241125024 328.950241125024 335.887941031174
|
||||
ATACCATCGCCTAAGATTGGCC ATACCATAGCCTAAAATTAGCC 332.848856616901 309.476145134398 318.241854893043
|
||||
AAACCGGCAGTA AATCCGGCAGTA 317.201144426162 305.365706144159 312.555666368026
|
||||
CACAACAACGTTCAA CACAACAACGTTCAA 320.677535999798 320.677535999798 327.306012831155
|
||||
TGGGTCGCGTCCCAG CAGTACCCAACCCCG 333.123346113342 246.742853521647 257.809384715704
|
||||
CTCCTAAACATGAAGAACCAGAAAT CTCCTAAACATGAAGAACTAGAAAT 329.191307133388 321.504803533715 329.322148156357
|
||||
TACTATTTCGTTTGC TACTATTTCGACCTC 316.071427737447 286.990612725496 295.372324621468
|
||||
TCCCTGGCAGCAGGGTAGTTTTGAA TGGGCCAACGCTAACTGGTGCCTTG 337.792849188337 121.771136708049 135.395255297683
|
||||
GCTACATTACCGGCTCTC GCTACATTACCGGCTGCC 328.627216292430 317.865179052925 326.512498741613
|
||||
TGAGGCGGGTTATGCGTTAATG TGAGGCGGGTTATGCGTTAATT 333.877486753212 330.936597263706 338.449826872471
|
||||
CACTTATCCCGCAATAAT AACTTATAACGCAAGAAT 323.209491396864 285.261497168294 294.371363704620
|
||||
CGCGCCCGACGATCCACT CCCGCCTGACGTTCCACC 338.845192827705 310.574091806929 319.266524881313
|
||||
AGGCTCCTCTATGAA AGTCTCCTCTATAAA 320.534065615391 298.120651463631 306.645491242189
|
||||
TGGTAATTGCCTGAG TGGTAATTGCCTGAG 320.915868643696 320.915868643696 327.776118922002
|
||||
GTTCATTCTCTGGAGGGC AAGCCGGTACCTGCGGGG 328.693062285185 175.795089391355 189.885811626097
|
||||
GAACGCTGGTCGTCACAT GAACGCTGGTCGTCACAT 331.556430142525 331.556430142525 338.434764177077
|
||||
ATTGGGTGATCGTAAGTAAG ATTGGGTGATCGTAAGTAAG 325.612525475036 325.612525475036 332.668318324958
|
||||
AAGATATGTTTGTAGGCCGAAC AAGATATGTTTGTAGGCCGAAC 329.104322856711 329.104322856711 336.238620405649
|
||||
GTGTGGGTGCCC GTGTGGGTGCCC 324.309319433451 324.309319433451 331.095278789318
|
||||
GGCGTCCAGAAT GGCGTCCAGAAT 318.801851843066 318.801851843066 325.371455269089
|
||||
TGGCTCTGGATAGCTCCCCC AAGGACTATACAAAGCCAGT 336.053481241646 140.181856955550 152.924856339728
|
||||
GTAATCTACCATATG GGAATCTACCATATG 311.238267655019 297.565035184391 305.303043725135
|
||||
TAGAGACGTTTCCTCGCCTTTATCG CTTAGACACTCAGGTGTTGTTGGCA 334.313541801127 188.908254593789 203.829299320958
|
||||
TGCCAGCTTGTGGCGAGTAT TGCCAGCTTGTGGCGAGTAT 335.045486995831 335.045486995831 342.139981881034
|
||||
TTCCGAGCCTGCCGAACAGG TTCCGAGCCTGCACACCCGG 337.981474268738 315.139472928922 324.695198064855
|
||||
TAGGCGACGGCTAACTGG ATTAACACAGAATGTAAC 332.611090573720 117.192190429110 129.003910625976
|
||||
CTATCAAGCCTCAGGTATCGCT CTATCAAGCCACAGGTATCGCT 332.013904222950 327.008869759689 334.361264460119
|
||||
GCGTTGAACAGTGCGTACGT GCGTTGAACAGTGCGTACGG 334.922740354371 331.487402480161 338.817709417777
|
||||
ATGACCTGTACGCTG TCACACCCTCGGTCG 324.096877104678 76.811640858322 84.402210669196
|
||||
TAGTTATCTTCTACCTGATGTAAGC TAATTATCTTCTACCAGATGTTAGT 327.657446380070 306.418404503197 315.329248976153
|
||||
CGGTGCAGTGCAAAATGCGAGTAGT CGGTGCAGTGCAAAGTGCGCGTAGT 338.234766348875 331.605213173016 339.892622743888
|
||||
TTGTTGCCATGTAAA TTGTTGCCATGTAAA 318.513544450161 318.513544450161 325.252135026214
|
||||
GTGAAACGTTTGCTGTGG GTGAAACGTTTGCTGTGG 328.992886751469 328.992886751469 335.904977195626
|
||||
GTTGGAATTGCGGCAAAG GTTGGAATTGCGGCAAAG 329.419693351400 329.419693351400 336.405013425441
|
||||
ATTTCCCGCAGCTTCGAC AGTTCCTGCAGCGTTGAC 331.921604125857 275.704268703669 286.426092962088
|
||||
GGGCTTCAACTCTGCAGA AACTTCCGATAGTACCCG 330.715768712068 0.000000000000 0.000000000000
|
||||
GTAGTACGTCACTTAGGGTATA GTAGTACGTCACTTAGGGTCTA 326.370618283308 323.603568352225 331.248373111091
|
||||
GTGATATTTTCACTGCTAGG GTGATATGTTCACTGCTAGG 324.660738933852 318.097303613935 325.739236970914
|
||||
TTAGAGCCTAGATATCGC TGAGAGCCTACATATCGC 323.737203572163 308.667021683076 316.877776506437
|
||||
GGCCGGTTTGAT GGCCGGTTTGAT 319.628239742093 319.628239742093 326.261640206404
|
||||
CGATAGTGGAAG CGTTTGTGGAAG 311.281036639251 282.148143916626 290.555750610531
|
||||
TTTATAGACGGTCCA TTAATAGAGGGTCCA 318.271295635730 289.396103709646 297.309467179028
|
||||
CTGGTGTAAATTTTTATT CTGGTGTAAATTTTTATT 316.242691168716 316.242691168716 323.159373336702
|
||||
CACGCAAAGACGAGTCGAGA CGCGCTAAGACGAGTCGAGC 333.509565254824 317.485155999984 326.212807278748
|
||||
GCCCCTGTCCGGACG GCCCCTGTCCGGGAG 334.323987481155 318.296185453565 326.861053252518
|
||||
AAGCCGGCACTA TAGCCGGCACTA 320.841087637638 315.681196183552 323.022375994306
|
||||
CCCCCTTGTTCT CCCACTGGTTCT 316.846355213233 271.731156926471 280.431509587266
|
||||
TTTGGGTCCGATACGTTA TTTGGGTCCGACAGGTTC 326.526907539640 304.936001347139 313.235900619784
|
||||
CTAGTAAGGTATAGAACT CTAGTAAGGTATAGAAAT 317.080850733325 306.909216639793 314.322636687809
|
||||
ACACTGCAACATGCAAGGCA TCTCTGCACCATACTAAGCA 334.279193488462 287.410425546330 298.337166942414
|
||||
CGGATACGTGAGCTGACCGTCACTG AGGGTTCATGAGCTGACCGTCACTG 339.003807135660 321.603408699629 331.135793238806
|
||||
CACAATCCTTTCATAGGTCTGATGT CACAAACCTAACATATGTCTGGTGT 330.769444740710 302.850977615703 312.757796843091
|
||||
ATAGGTGTATTACTTCCC ATAAGTGCATTACTTCCC 320.813390192036 307.309069291562 315.330380672069
|
||||
TGCCCGTGCTAATTTCGG TGCCCGTGCGAATTTCGA 331.916704163337 321.788326255281 329.840680268581
|
||||
CATACCTCCCGTGTGACC CAGACCTCCTGTCTGAGC 330.790040366578 275.685519938138 285.797334919463
|
||||
CATGCGAATGAACGTGGTCAAC CATGCGAATGAACGTGGTCAAC 333.744727353783 333.744727353783 340.783101574584
|
||||
GGTCCAGCCAGC GGGCCGGCCAGA 323.997990076396 258.335190180963 269.085542668344
|
||||
TCAGCCTCTTACTACGAA TCAGCCTCTTACTACGAA 325.504908314887 325.504908314887 332.433608839830
|
||||
TTCCACTCGGTA TTTAACTCGTCA 315.163712062905 240.754025130773 251.279252359821
|
||||
GTACCCATCCGTTAACCACATT GTACCCATCAGTTAACCACATT 330.965975035173 322.116695925385 329.685541486863
|
||||
TCGGATTTGTGG TCGTATATGCGT 315.144792522878 261.302945400146 270.745105924733
|
||||
CAGGGGTTTGTAGCTTGCAT AAAAGGTCGACATGAAACTC 331.592676687332 178.298382734095 192.121517719714
|
||||
GTATGTTTAGATTCCGGT GTATGTTCACATTCCGGT 322.407865448171 309.819055451666 317.927267476480
|
||||
ATTTGAAGGTTGTTCATT ATTTGAAGGTTGTTTATT 320.745098479303 308.460034775676 316.604473343016
|
||||
ACGGTGGCCGGCGACCTCAGCCGCA TCGGTCTCCGGCGAGCTCAGTCGCA 349.319476545950 322.805970408218 332.569513311728
|
||||
GGTGAAACATGGGTGGTATGATAAT GGTGAAACATGGGTGATATGATAAT 331.043479784795 326.332708138854 334.184817037240
|
||||
AAGTGTAATCGACTA AAGTGTAATCGACTA 315.631885291475 315.631885291475 322.265747968200
|
||||
GAAGAAAATCCGTTTAGT GAAGAAATTTCGATTAAT 320.919322767873 264.519341261783 274.695121470457
|
||||
GTATACCTACCGCCAGGCGTAA GTATACCTACCGCCAGGCGTAA 334.199822075507 334.199822075507 341.373552239777
|
||||
GGGCTTGCAAATGCACTAGT GGGCTCGCAAACGCACATGT 332.244946736482 316.459896257268 324.959991904042
|
||||
AGTAACATTACCCCTCTT AGTAACATTACCCCTCTT 322.762790159849 322.762790159849 329.855166947719
|
||||
ATCGTTCCAGATTCA ATAGTTCCACATTGA 319.593588349254 263.703483135864 273.889968541208
|
||||
ATCTAGACAAAT CTCTAGACAAAT 303.769798710798 299.975537128382 306.767744251403
|
||||
GACTCGTGCCCAAAGGCG GACTCGGGCCTAAACGCG 335.453032103533 305.944507861049 314.863300937474
|
||||
ATACCTGAAAGATACATAGGGAGGG ATACCCTAACGATACATAGGGAGGG 330.838488925824 319.951646252133 328.421632500441
|
||||
CTCCTTCTATATCTTTACGC CTCCTTCTATATCTTTACGC 323.614245457101 323.614245457101 330.629799804542
|
||||
GGAACGACAGCGGAC GGAGCGACATCGGAG 329.215799373567 299.203726696696 307.870410467643
|
||||
AATTAAACTTCACTTGCTGCTA AATTAAACCGCACTTGCTGCTA 326.774684409898 319.760152873130 327.648310708541
|
||||
CGGGGTGGTTTTAACGCCTT CGGGGTGGTTTTAACGCCTT 334.293634381856 334.293634381856 341.479503422465
|
||||
TTACAAGTGTAC TTACAAGTGTAC 306.490429220235 306.490429220235 312.860219905519
|
||||
GGTTTTACGCACTCGTTT GGTTGTACGCACCCGTTT 327.475666665468 315.253671257952 323.597273287183
|
||||
GCGACCGGGATATTCGTG GCGACTGTGATATTCGTG 332.081729064974 312.612274551236 320.900746018201
|
||||
AAATCATAGATGTTTGTGTG AAATCTTAGACGTTTGTGTG 322.490478539460 311.233326719324 319.056840527317
|
||||
CCGCGGCTGGCCAGTGCG CCGGGGCTGGTCAGTGCG 343.595298549215 320.692138927062 329.428906251676
|
||||
TTAGCGCCCCCT TTAGAGGCCCGT 323.638703533546 223.193289824279 232.649538093037
|
||||
CGACTCCTTGCG CAACTCGTTGCG 321.093094443631 287.627523199553 294.941907978827
|
||||
CAAATAGGGGAGAAATAGGGATGAT CAAATAGGGGAGACATAGGGATGAT 329.829565362939 326.229605874518 334.271529764424
|
||||
TTATGACTCTAT TTATGACTCTAT 302.351970012031 302.351970012031 308.749474038831
|
||||
CTTCGCACGGCTCTGAGGTG CTTCGCACGGCTCTGAGGTG 336.758970783676 336.758970783676 343.832413942225
|
||||
GGTAGATCGTCTAACACA GGTGGATAGTCTAGCACA 324.183145729044 288.591703366550 297.757637466896
|
||||
TCCGAAGTTATTTGT TCCGAAGTTATTCGC 317.020120014950 307.809184902247 315.094442186122
|
||||
ACGCTATAGGTATCCAATGTGC TGAGGGGTTGCCTCGCGCGAGA 330.668816473345 168.517116213496 182.239452513402
|
||||
ATCCCGGTGTTT CTCGCGTTCTTT 316.963839881018 238.291774003272 248.409713749044
|
||||
TGTAAATATTGAGAACAT CTACTTGTAAAAATTATC 316.552099039474 4.196619607978 4.793908669173
|
||||
TAAGATGGCGGTGCTAAGGT TAAGATGGCGGTGCTAAGCT 331.748855931570 328.095422595895 335.422537658975
|
||||
CAGAGAATCGTATTG TAGAGAATCGTATTG 316.058437382107 309.336246420051 316.478881368674
|
||||
ACACTATCGCAT ACACTATTGCAT 313.287559156327 289.002177419194 296.901322522936
|
||||
TTTGCAACAAACTGCGGG TTTGCAACAAACTGCGGG 330.987598215230 330.987598215230 337.964638501570
|
||||
TGCGCATTGACCGTATGA TGAGCATTGCAAATATGA 330.724505651688 291.707022981886 301.075127848151
|
||||
CTGCAACGTGGCTGACGTGG CTGCAACGAGGCTGACGTGG 337.828829590951 332.158127068020 339.396841315526
|
||||
AATCTAGGTATTCTGTGCACACTAG AATCTAGGTATTCGGTAGACACTAG 330.093652788304 312.242546896813 320.851841260874
|
||||
ACGGCGAAACTGTCCCGT ACGGCGAAACTGTCCCGT 335.434181438533 335.434181438533 342.388102607306
|
||||
AACGAGTACTCTTTGCACGCGC AACGAGTACTCTTTGCAAGCGC 336.704192051484 329.670890289599 337.116780737979
|
||||
ACGGCCACCCGCGTAAGCCAGT ACGACCACCCGCGCTAGCCAGT 343.225833795195 335.051197281573 343.935168403898
|
||||
AGGTGGAAACACCTCTTTATAG AGGTGGAAACACCTCTTTATAG 327.767855921026 327.767855921026 335.018188736768
|
||||
GATGCACCTCTTCCTTGT GATGCACCTAGTCCTTGT 328.015528597840 315.813502381439 323.875578738504
|
||||
CACACGTTAAATCAGCCGTGAC CACACGTTAAATCAGCCGTGAC 333.178564800892 333.178564800892 340.213130099053
|
||||
GTGAAAAACGCTAAAACT GAGAAAAACGCTGAAACT 322.651310853696 305.102360687419 313.386535231522
|
||||
CCTCTAAGCGTAAACTGGCGTA CCTCTAAGCGTAAACTGGCGTA 332.731489287653 332.731489287653 339.833318025496
|
||||
CTTAACGGATCAGGTGCC CTTAACGGATGAGGTACC 329.145552153189 309.298607409059 318.329957990940
|
||||
ACCAGCGCGGGTCCAAGCCGGG AACAGCGCGGGTCAAAGCCCGG 346.277068986675 323.989295670246 332.757718044482
|
||||
GGTCGCCCTTGGTTG GGTCGCCCTTGGTTG 329.378530415267 329.378530415267 336.338999066477
|
||||
GGTCTTTCCTGATAG GGTCTTTCCTGCTAG 317.502443546558 312.248143518990 319.891057909696
|
||||
ATGGGGTCCCTTGGATAA ATGGGCTCACTTGGAGAA 327.935969186382 299.834873075580 308.768543906097
|
||||
AGACTTTATCTGCGTTAG CGACTTAATCTGCATTGG 322.530698528657 290.771157085417 299.660782150129
|
||||
TTCTAGCCTGTGCCATTCATTCGCG TGTCTTTAATCATTCACTGCATTTT 337.662752230513 0.000000000000 0.000000000000
|
||||
GTGGCGTGATCCGCCTATGATG GTGGCGTGATACGCCTATGATG 336.412147017699 328.612405834565 336.461928234461
|
||||
ATTATCCTGCAGAGCAGTGA ATTATCCTGCAGAGCAGTGA 329.338095898179 329.338095898179 336.434344794516
|
||||
TGGGGTCACGCATGGCACCG TCGTTTCCGCGTAGACACAT 340.932042495783 219.946305376159 234.105527008232
|
||||
GATCAGTCATGCCGGGCA TCGCTCACTGGGAGCTTT 333.615526310877 70.980108149928 78.760105051004
|
||||
GAGAAACTACCAACCACC GAGAAACTACCAACCACC 326.141893376412 326.141893376412 333.228102476867
|
||||
ATTGACTAGCCTGGAGGC ATTGACTCGCCTGGAGGC 329.814592678115 325.021169884577 332.608693895943
|
||||
ACGGAGTCTATTGTC AAGGAGTCTATTGTC 319.985406470302 306.562131243465 313.933774764732
|
||||
TGGCTGATTGGCCATTATTC TGGGTGATTGGCCATTATTC 329.296931346104 317.833565606159 325.604567901985
|
||||
TGTTACGGACGGACG TGTCAGGGACGCACG 327.360275144725 294.262459737383 302.641243348176
|
||||
AACGCTCCTTCTGACGCTCTGTACC AACTCTCCTGCTGACGCTCTGCACC 338.281645508427 324.671859746526 333.350952165099
|
||||
CTTTCTACAAGCTTCCTCAGCCGAT CTTTCTACAAGCTTCCTCAGCCGAT 334.726254329200 334.726254329200 342.014376175497
|
||||
CTGGGAGCGTGT CTGGGAGCGTGT 322.225101677135 322.225101677135 328.814148322577
|
||||
GCAAGTGCTCCATACGTCAGGA GCAAGTGCTCCATACGTCAGGA 335.151235041562 335.151235041562 342.311691193007
|
||||
TTGAACTCGAAGTCATTCCAGCCCA TTGTACTTGAAGCCATTCCAGCCCA 336.086839523526 320.167401115734 329.871603131488
|
||||
CGCGAGTGTTAATTTTCATC CGCGAGTGTTAATTTTCATC 326.706848503872 326.706848503872 333.607112791387
|
||||
CTCGAAATCAGCCTA CAGGCAGATCCGATA 320.433152901209 106.785241479223 115.721577071620
|
||||
CCCACGTTGGATCCCTCA CACACCCAGCGTTCCCCT 332.434732686040 168.247008949882 182.904021311056
|
||||
TCTTCCCGAAGGCAACTA TTGCTAGCCACCGCTACC 328.742342595200 0.000000000000 0.000000000000
|
||||
TCGGTCGCCCGGCCA TCGGTCGCCCGGCCA 338.280658715332 338.280658715332 345.187830452143
|
||||
TTCCGGTCTAGAGAT GTCCCGTCTAGAGAT 320.290802240471 304.664615132156 311.959714415134
|
||||
TGCCACGTTTGG TTCCACCTTTGG 320.673142294482 289.947588641272 298.070057172917
|
||||
CTGAGAACATGG GTTAAGTTAAAA 311.861058614240 0.000000000000 0.000000000000
|
||||
TTCCCATTTGCAACG TTCCCATTTGCAACG 323.462465099785 323.462465099785 330.249305701134
|
||||
AAGAGTTACTGGATTACC ATTACATGTTGAGCTAAC 321.460730667492 45.295339819983 50.838550888654
|
||||
AAAACTCATTACCGTCAATGTGCCG AAAACTCATTACCGTCAATGTGCCG 334.427238998430 334.427238998430 341.612309670089
|
||||
CGGGAAATCATGCACTTC CGGGAAATCATGCAGTTC 327.837268831791 315.451695083719 322.783155312403
|
||||
TCTTGTCCATCAGACAGA ACTTGTCGACCAGACAGA 325.674390994389 302.134938899268 310.971599041593
|
||||
TAACTTTGCCGTGCGTTC TTGCATAGCATGCAATTT 330.185153783687 164.313401929230 176.255433198370
|
||||
GAGATTGACGACTAACCT GAGATTGACGACTAACCT 324.455556483854 324.455556483854 331.390094199272
|
||||
CCGCGAGTCCACGGCGTAAG CCGCGAGTCCACGGCGTAAG 339.144645429285 339.144645429285 346.143799055883
|
||||
TGACGGCGAGTGAGTTTT GGATTAGTCATCATCGCG 330.479181965474 47.596928980319 53.756086430128
|
||||
AGCAACGTCTAAACTCGATT AGCAACGTCTAAACTCGATT 328.165361220407 328.165361220407 335.096430259205
|
||||
GACTGCTAGCTGGCT GAATTATCACGTTCC 326.800285243793 145.119103179615 155.884495817015
|
||||
ACCCTCGTAATTATTCCG GCCTCGCTAGAGAGGGAA 324.895708998494 137.294573703070 148.579615770821
|
||||
AGCGGGCCGGCGCCCACGGTTAAAT AGCGGGACGGCTCCCACGGATAAAT 346.469332548688 327.821835178262 336.666611815380
|
||||
ATACACCAGTCTCCACTGTGTCAGC ATACACCAGTCTCCACTGTGTCAGC 336.084026510573 336.084026510573 343.378799103379
|
||||
AGGCAACGGTGTTTTTAGTTTCAAG AGGCAACGGTGCTTTTAGTTTCAAG 332.791413039949 329.450267766259 337.042137604359
|
||||
CATAGTATGGTTCATAATTTAA CAAAGACGGGATTATCGGACTT 319.805110852434 183.915523269303 197.052684250500
|
||||
ACGCCCCCCGGATTCGGC ACGCCCCGCGGATTCGGC 341.276243356091 331.161466849465 338.916726408046
|
||||
TTGTCTTTCGAGCGG TTGTGTGTCCAACCA 325.282149224729 222.156190895896 232.598751363606
|
||||
CTCCCGGGCGCCAGATGG CTCCCGGGCGCCAGATGG 339.311369482363 339.311369482363 346.533954436015
|
||||
GCACACTTTGTCGGTAAGTGAGGAC GCACACTTTGTCGATAGCTGAGGAC 336.007697297418 324.718456248143 333.231550897913
|
||||
ATATAGTCTCCGTGT ATATAGTCTCCGTGT 317.670914323835 317.670914323835 324.391677867921
|
||||
ATTCGAGGCGGCTCTGAGGT GTTCGAGGCGGCTCCGTGGT 336.308093587336 324.901517012421 333.408982676338
|
||||
CGCTAGCTCTCAGCATAA CGCTAGCTCTCAGCTTAA 327.750384254086 320.869735908381 328.340764122397
|
||||
TACTCACTCTAATTCAAC TACTAACTCCAATTGATC 319.232623419269 263.254120288054 273.886368603122
|
||||
CTTGGAATCTTGTTCCGC CTTGGAATCTTGTTCCGC 327.748687917447 327.748687917447 334.748570070981
|
||||
TCTCTCTCTACTGAAGATGT TCTCTCTCTACTGAAGATGT 324.955441779254 324.955441779254 332.010856900828
|
||||
AGATAGCTAAACTATGGTATTT AGATAGCTAAACTATTGTATTT 322.379524984208 314.920600083519 322.617736532767
|
||||
TCCAGTAGGCCTGCACACCC TCCTGTAGGCCTGCACACCC 337.082762403533 331.065336200951 338.847431016473
|
||||
CCGGTCGGTTAA CCGAGCGGTCAA 318.298891942113 278.422489888824 287.988343096102
|
||||
TGCGGTATTACACAGTAC TGCGGTACTAGACCGGAC 325.257155822510 277.211655556984 287.317024862518
|
||||
TAGGTTGAGATGTTCGGGCG TAGGTTGAGATGTGCGGGCG 332.954776706522 326.896199598776 334.681687928661
|
||||
TCGAACCTCTAA TCGAACCTCTAA 311.195901304215 311.195901304215 317.645142918670
|
||||
GGCCGTTGGGTGAGATGT GGCCGTTGGGTGAGATGT 333.461534051827 333.461534051827 340.580014223162
|
||||
TTACGATTAGTAGAC TTACGATTAGTAGAC 313.227722774298 313.227722774298 319.837422500332
|
||||
GCTGGCAGACTTCCGGGA GCAGGTAGACTGGCGGGA 335.491766864185 300.268242946003 309.735154150044
|
||||
|
+13
@@ -0,0 +1,13 @@
|
||||
AAACTGGGATTAGATACC 48.5
|
||||
ACACCTCGACCTGACGTT 58.8
|
||||
ACTTACCATGTTACGACT 50.8
|
||||
CAAACTGGGATTAGATAC 47.5
|
||||
CCAAGTGCACCTTCCGGT 60.7
|
||||
CCTGTTCTAGAACCGATA 50.8
|
||||
CTACACCTCGACCTGACG 57.5
|
||||
CTTTTGCCACAGAGACGG 57.0
|
||||
GCCAAGTCCTTTGGGTTT 56.2
|
||||
GGGATTAGATACCCCACT 52.6
|
||||
GTTCTAGAACAGGCTCCT 53.6
|
||||
TCGTACCTTTTGCATCAT 52.2
|
||||
TTCTAGAACAGGCTCCTC 53.3
|
||||
|
Reference in new issue
Block a user