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Reduce memory allocation events

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Former-commit-id: fbdb2afc857b02adc2593e2278d3bd838e99b0b2
This commit is contained in:
Eric Coissac
2024-06-22 21:01:53 +02:00
parent 54a138196c
commit e6b87ecd02
19 changed files with 166 additions and 75 deletions
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4
pkg/obiformats/fastaseq_read.go
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@@ -228,7 +228,9 @@ func ReadFasta(reader io.Reader, options ...WithOption) (obiiter.IBioSequence, e
nworker := opt.ParallelWorkers()
chkchan := ReadSeqFileChunk(reader, _EndOfLastFastaEntry)
buff := make([]byte, 1024*1024*1024)
chkchan := ReadSeqFileChunk(reader, buff, _EndOfLastFastaEntry)
chunck_order := obiutils.AtomicCounter()
for i := 0; i < nworker; i++ {