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Work on iterators and recycling of biosequences

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This commit is contained in:
Eric Coissac
2022-01-14 23:11:36 +01:00
parent ef66ca4972
commit e8fff6477b
22 changed files with 350 additions and 111 deletions
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6
pkg/obiseq/biosequence.go
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@@ -44,7 +44,7 @@ func (s BioSequence) IsNil() bool {
return s.sequence == nil
}
func (s BioSequence) Reset() {
func (s *BioSequence) Reset() {
s.sequence.id.Reset()
s.sequence.definition.Reset()
s.sequence.sequence.Reset()
@@ -168,6 +168,10 @@ func (s BioSequence) SetQualities(qualities Quality) {
s.sequence.qualities.Write(qualities)
}
func (s BioSequence) WriteQualities(data []byte) (int, error) {
return s.sequence.qualities.Write(data)
}
func (s BioSequence) Write(data []byte) (int, error) {
return s.sequence.sequence.Write(data)
}