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Several bug in annotation management
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@@ -110,7 +110,7 @@ func AssemblePESequences(seqA, seqB *obiseq.BioSequence,
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arenaAlign obialign.PEAlignArena) *obiseq.BioSequence {
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score, path := obialign.PEAlign(seqA, seqB, gap, delta, arenaAlign)
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cons, match := obialign.BuildQualityConsensus(seqA, seqB, path)
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cons, match := obialign.BuildQualityConsensus(seqA, seqB, path,true)
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left := path[0]
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right := 0
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