Eric Coissac 3f8c0d6a2f Replace MakeBioSequence call by NewBioSequence call, ...

Implements a new file format guesser
Adds some more API doc


Former-commit-id: 9837bf1c28beca6ddb599b367f93548950ba83c1

2023-08-30 19:59:46 +02:00

..

attributes.go

A first prototype for the space of sequences

2023-08-27 14:58:55 +02:00

biosequence_test.go

Replace MakeBioSequence call by NewBioSequence call,

2023-08-30 19:59:46 +02:00

biosequence.go

Replace MakeBioSequence call by NewBioSequence call,

2023-08-30 19:59:46 +02:00

biosequenceslice.go

Optimize memory allocation of the apat algorithms

2023-03-28 19:37:05 +07:00

class.go

Change the annotation locker to a pointer to mutex to avoid coying mutex

2023-08-27 16:00:35 +02:00

compare.go

Add the possibility to look for patterns allowing indels.

2023-03-20 15:28:24 +07:00

eval.go

Refactoring codes for removing buffer size options. An some other changes...

2023-03-07 11:12:13 +07:00

join.go

Adds some documentation

2022-08-23 11:11:36 +02:00

language.go

Change the annotation locker to a pointer to mutex to avoid coying mutex

2023-08-27 16:00:35 +02:00

merge.go

Optimize memory allocation of the apat algorithms

2023-03-28 19:37:05 +07:00

paired_reads.go

change the model for representing paired reads and extend its usage to other commands

2023-02-23 23:35:58 +01:00

pool.go

Replace MakeBioSequence call by NewBioSequence call,

2023-08-30 19:59:46 +02:00

predicate.go

Refactoring codes for removing buffer size options. An some other changes...

2023-03-07 11:12:13 +07:00

revcomp.go

move the worker class to the obiseq package

2023-01-22 22:39:13 +01:00

subseq.go

Optimize memory allocation of the apat algorithms

2023-03-28 19:37:05 +07:00

worker.go

Patch an aligment bug on obipairing

2023-01-25 13:22:56 +01:00