Eric Coissac 438893d910 refactor: improve FASTQ error messages with explicit filenames ...

The options system now tracks explicit file paths via a new accessor and functional option. This filename is threaded through the FASTQ parser chain to replace generic source references in fatal error messages, providing clearer, file-specific diagnostics without altering core parsing logic or test suites.

2026-08-19 16:47:36 +02:00

..

abiapat

First commit

2022-01-13 23:27:39 +01:00

apat_mem.h

First commit

2022-01-13 23:27:39 +01:00

apat_parse.c

First commit

2022-01-13 23:27:39 +01:00

apat_search.c

Add the possibility to look for patterns allowing indels.

2023-03-20 15:28:24 +07:00

apat.h

Optimize memory allocation of the apat algorithms

2023-03-28 19:37:05 +07:00

ecoMalloc.c

First commit

2022-01-13 23:27:39 +01:00

libstki.c

Add a missing prototype

2023-08-27 15:51:23 +02:00

libstki.h

Add a missing prototype

2023-08-27 15:51:23 +02:00

obiapat.c

Patch type mismatch in apat C library

2025-04-23 16:14:10 +02:00

obiapat.h

Patch type mismatch in apat C library

2025-04-23 16:14:10 +02:00

pattern_test.go

Doc change

2023-08-27 17:06:36 +02:00

pattern.go

refactor: improve FASTQ error messages with explicit filenames

2026-08-19 16:47:36 +02:00

pcr.go

introduce obidefault

2025-01-27 17:12:45 +01:00

predicat.go

Add option related to agrep match on obigrep and obiannotate

2024-09-09 16:52:13 +02:00