Eric Coissac 5c30ec354f Go implementation of fasta and fastq parser ...

Former-commit-id: 3f4fd355c169afbef2d5fef1f5e407aabb71d031

2023-09-03 19:16:37 +02:00

..

kseq

First commit

2022-01-13 23:27:39 +01:00

ncbitaxdump

Rename the Length methods Len to follow GO standart

2022-11-17 11:09:58 +01:00

batch_of_files_reader.go

First attempt for obiconsensus... The graph traversing algorithm is too simple

2023-03-27 19:51:10 +07:00

batch_reader_type.go

rename the iterator class

2023-01-22 22:04:17 +01:00

csv_writer.go

rename goutils to obiutils

2023-03-24 10:25:12 +07:00

dispatcher.go

A small bug in logging and API documentation

2023-08-14 15:21:30 +02:00

ecopcr_read.go

A go implementation of the fasta reader

2023-09-01 09:30:12 +02:00

embl_read.go

A go implementation of the fasta reader

2023-09-01 09:30:12 +02:00

fastaseq_read.go

Go implementation of fasta and fastq parser

2023-09-03 19:16:37 +02:00

fastqseq_read.go

Go implementation of fasta and fastq parser

2023-09-03 19:16:37 +02:00

fastseq_header.go

A small bug in logging and API documentation

2023-08-14 15:21:30 +02:00

fastseq_interface.go

Big change iin the data model, and a first version of obiuniq

2022-02-21 19:00:23 +01:00

fastseq_json_header.go

rename goutils to obiutils

2023-03-24 10:25:12 +07:00

fastseq_obi_header.go

rename goutils to obiutils

2023-03-24 10:25:12 +07:00

fastseq_read.c

Patch reading of annotation from stdin

2022-09-29 14:48:05 +02:00

fastseq_read.go

A go implementation of the fasta reader

2023-09-01 09:30:12 +02:00

fastseq_read.h

First commit

2022-01-13 23:27:39 +01:00

fastseq_write_fasta.go

Adds doc

2023-08-14 10:04:16 +02:00

fastseq_write_fastq.go

Adds some docs

2023-08-14 00:12:17 +02:00

genbank_read.go

A go implementation of the fasta reader

2023-09-01 09:30:12 +02:00

ngsfilter_read.go

Patch a bug in ngsfilter reading and sample matching

2022-09-28 14:29:19 +02:00

options.go

A go implementation of the fasta reader

2023-09-01 09:30:12 +02:00

universal_read.go

Go implementation of fasta and fastq parser

2023-09-03 19:16:37 +02:00

universal_write.go

Patch the empty batch bug

2023-03-07 20:16:06 +07:00

xopen_test.go

A go implementation of the fasta reader

2023-09-01 09:30:12 +02:00

xopen.go

A go implementation of the fasta reader

2023-09-01 09:30:12 +02:00