Eric Coissac 7a979ba77f Add obisuperkmer command implementation and tests ...

This commit adds the implementation of the obisuperkmer command, including:

- The main command in cmd/obitools/obisuperkmer/
- The package implementation in pkg/obitools/obisuperkmer/
- Automated tests in obitests/obitools/obisuperkmer/
- Documentation for the implementation and tests

The obisuperkmer command extracts super k-mers from DNA sequences, following the standard OBITools architecture. It includes proper CLI option handling, validation of parameters, and integration with the OBITools pipeline system.

Tests cover basic functionality, parameter validation, output format, metadata preservation, and file I/O operations.

2026-02-07 13:54:02 +01:00

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obitools

Add obisuperkmer command implementation and tests

2026-02-07 13:54:02 +01:00

test

Make sequence files recognized as a taxonomy

2025-03-14 14:22:22 +01:00