Eric Coissac cbd42d5b30 Implements a parallel version of Kmeans ...

Former-commit-id: 58ab24b9b274451e00eea0275249234e2c2ea09b

2023-08-26 01:26:40 +02:00

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obialign

Add some doc and switch to the parallel gzip library

2023-08-25 14:36:38 +02:00

obiapat

Patch a bug for multiple amplicon per sequence.

2023-03-31 15:10:25 +02:00

obichunk

Optimize memory allocation of the apat algorithms

2023-03-28 19:37:05 +07:00

obicorazick

Adds Aho-Corasick matching to obiannotate

2023-02-09 15:59:11 +01:00

obiformats

Add some doc and switch to the parallel gzip library

2023-08-25 14:36:38 +02:00

obiiter

Add some doc and switch to the parallel gzip library

2023-08-25 14:36:38 +02:00

obikmer

Correct a bug when sequence length is shorter than kmer size in debruijngraph

2023-06-07 17:43:32 +02:00

obingslibrary

Rename forward and reverse mitmatches tags

2023-04-18 12:08:13 +02:00

obioptions

several small changes

2023-06-07 17:50:10 +02:00

obiseq

several small changes

2023-06-07 17:50:10 +02:00

obistats

Implements a parallel version of Kmeans

2023-08-26 01:26:40 +02:00

obisuffix

First attempt for obiconsensus... The graph traversing algorithm is too simple

2023-03-27 19:51:10 +07:00

obitax

Restore old obisort and add LCA functionnality to obiannotate.

2023-05-02 10:43:22 +02:00

obitools

Implements a parallel version of Kmeans

2023-08-26 01:26:40 +02:00

obiutils

first trial of obilandmark

2023-08-25 23:23:23 +02:00