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obitools4/cmd
Eric Coissac 574221df42 Refactor taxonomy handling and improve performance
This update introduces logic for handling embedded taxonomy, allowing users to specify taxonomy or extract it from sequences, while optimizing performance through reduced memory usage. It also adds batch reordering capabilities and implements comprehensive testing to ensure correct precedence rules and robust error handling for missing taxonomic paths.
2026-11-03 22:44:44 +11:00
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