obitools/obitools4
2
0
Fork 0
mirror of https://github.com/metabarcoding/obitools4.git synced 2026-06-24 01:31:00 +00:00
Code Issues Packages Projects Releases Wiki Activity
Files
dcdaf9e372ccca750b3b38f19cec2b76dc38c3bd
obitools4/pkg
T
History
Eric Coissac dcdaf9e372 feat: support map and slice types in OBI attributes 
Extends OBI header parsing to recognize and deserialize JSON-like arrays and objects. Introduces safe conversion utilities in `obiutils` to cast generic interface values into typed maps, and exposes them via new `BioSequence` methods. Header values are now marshaled, quote-normalized, and formatted for map and slice types.
2026-06-01 13:21:11 +02:00
..
obialign
work on obiclean chimera detection
2025-10-20 17:29:47 +02:00
obiapat
debug obimultiplex
2025-11-06 15:43:13 +01:00
obichunk
Fix classifier cloning and reset in chunk processing
2026-02-08 15:52:25 +01:00
obicorazick
Add progress bar configuration and conditional display
2026-02-08 16:14:02 +01:00
obidefault
refactor: replace single batch size with min/max bounds and memory limits
2026-03-13 15:07:35 +01:00
obidist
Add Jaccard distance and similarity computations for KmerSet and KmerSetGroup
2026-02-05 17:39:23 +01:00
obiformats
feat: support map and slice types in OBI attributes
2026-06-01 13:21:11 +02:00
obifp
Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.
2025-03-25 16:44:46 +01:00
obigraph
Add obiminion first version
2024-05-14 08:16:12 +02:00
obiiter
refactor: replace fixed batch size with dynamic flushing based on count and memory
2026-03-16 22:06:44 +01:00
obiitercsv
break the import cyccle
2025-01-27 17:23:07 +01:00
obikmer
Correct Shannon entropy bias for canonical k-mers
2026-05-17 14:54:57 +08:00
obilog
Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.
2025-03-25 16:44:46 +01:00
obilua
chore: bump version to 4.4.39
2026-04-14 14:48:29 +02:00
obingslibrary
Changes to be committed:
2025-06-17 09:06:42 +02:00
obioptions
[4.4.2] Enhanced taxonomy handling, input robustness & PCR tag validation
2026-04-30 16:57:45 +02:00
obiphylo
Changes to be committed:
2025-06-04 09:48:10 +02:00
obiseq
feat: support map and slice types in OBI attributes
2026-06-01 13:21:11 +02:00
obistats
Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.
2025-03-25 16:44:46 +01:00
obisuffix
Swich to the system min and max functions and remove the version from obiutils
2024-05-30 08:27:24 +02:00
obitable
many changes ;-)
2023-12-05 15:28:29 +01:00
obitax
feat(obiconvert): add --raw-taxid option and refactor taxID formatting
2026-04-30 16:57:38 +02:00
obitools
🔧 Rename mismatch fields to error in pcrtag.go
2026-04-29 15:29:25 +02:00
obiutils
feat: support map and slice types in OBI attributes
2026-06-01 13:21:11 +02:00