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MOD: updated the help to include the -P option

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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@424 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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Frédéric Boyer
2012-05-16 11:56:36 +00:00
parent 2452df90de
commit 0a62ff49cc
1 changed files with 2 additions and 1 deletions
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src/ecofind.c
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@ -149,7 +149,7 @@ void gettaxidparents(int32_t taxid, ecotaxonomy_t *taxonomy, char *rankname, int
static void ExitUsage(stat) static void ExitUsage(stat)
int stat; int stat;
{ {
PP "usage: ecofind [-d database] [-h] [-l] [-r taxonomic rank] [-p taxid] [-s taxid] <taxon name pattern> ... \n"); PP "usage: ecofind [-d database] [-h] [-l] [-P] [-r taxonomic rank] [-p taxid] [-s taxid] <taxon name pattern> ... \n");
PP "type \"ecofind -h\" for help\n"); PP "type \"ecofind -h\" for help\n");
if (stat) if (stat)
exit(stat); exit(stat);
@ -180,6 +180,7 @@ static void PrintHelp()
PP " Write the database radical without any extension.\n\n"); PP " Write the database radical without any extension.\n\n");
PP "-h : [H]elp - print <this> help\n\n"); PP "-h : [H]elp - print <this> help\n\n");
PP "-l : [L]ist all taxonomic rank available for -r option\n\n"); PP "-l : [L]ist all taxonomic rank available for -r option\n\n");
PP "-P : [P]ath : add a column containing the full path for each displayed taxon\n\n");
PP "-p : [P]arents : specifiying this option displays all parental tree's information for the given taxid.\n\n"); PP "-p : [P]arents : specifiying this option displays all parental tree's information for the given taxid.\n\n");
PP "-r : [R]estrict to given taxonomic rank\n\n"); PP "-r : [R]estrict to given taxonomic rank\n\n");
PP "-s : [S]ons: specifiying this option displays all subtree's information for the given taxid.\n\n"); PP "-s : [S]ons: specifiying this option displays all subtree's information for the given taxid.\n\n");