obitools/ecopcr
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@68 60f365c0-8329-0410-b2a4-ec073aeeaa1d

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This commit is contained in:
Eric Coissac
2007-06-18 08:46:15 +00:00
parent fc26a9fda3
commit 388fe75522
1 changed files with 6 additions and 5 deletions
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11
src/ecogrep.c
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@ -6,6 +6,7 @@
#include <stdlib.h> #include <stdlib.h>
#include <sys/stat.h> #include <sys/stat.h>
typedef enum typedef enum
{ {
FALSE = 0, FALSE = 0,
@ -230,7 +231,7 @@ int main(int argc, char **argv){
/** /**
* check at leat one processing is asked * check at leat one processing is asked
* either patterns or taxid filters * either patterns or taxid filters
*/ **/
if ( p == NULL && restricted_taxid == NULL && ignored_taxid == NULL ) if ( p == NULL && restricted_taxid == NULL && ignored_taxid == NULL )
{ {
errflag++; errflag++;
@ -239,13 +240,13 @@ int main(int argc, char **argv){
ExitUsage(errflag); ExitUsage(errflag);
/** /**
* Get the taxonomy back * Get the taxonomy back
*/ **/
taxonomy = read_taxonomy(database); taxonomy = read_taxonomy(database);
/** /**
* Parse the stream * Parse the stream
*/ **/
for (k=0 ; argc >= optind ; optind++, k++){ for (k=0 ; argc >= optind ; optind++, k++){
matchingresult = 0; matchingresult = 0;