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patch to correct bug in switch between parts of the sequence database

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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@8 60f365c0-8329-0410-b2a4-ec073aeeaa1d
This commit is contained in:
Eric Coissac
2007-02-15 17:23:39 +00:00
parent f31a7679c6
commit 78205cb1a3
1 changed files with 11 additions and 2 deletions
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13
src/libecoPCR/ecoseq.c
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@ -152,6 +152,9 @@ FILE *open_seqfile(const char *prefix,int32_t index)
"%s_%03d.sdx",
prefix,
index);
fprintf(stderr,"Coucou %s\n",filename_buffer);
if (filename_length >= 1024)
ECOERROR(ECO_ASSERT_ERROR,"file name is too long");
@ -172,6 +175,7 @@ ecoseq_t *ecoseq_iterator(const char *prefix)
{
static FILE *current_seq_file= NULL;
static int32_t current_file_idx = 1;
static char current_prefix[1024];
ecoseq_t *seq;
if (prefix)
@ -180,8 +184,11 @@ ecoseq_t *ecoseq_iterator(const char *prefix)
if (current_seq_file)
fclose(current_seq_file);
strncpy(current_prefix,prefix,1023);
current_prefix[1024]=0;
current_seq_file = open_seqfile(prefix,
current_seq_file = open_seqfile(current_prefix,
current_file_idx);
if (!current_seq_file)
@ -195,8 +202,10 @@ ecoseq_t *ecoseq_iterator(const char *prefix)
{
current_file_idx++;
fclose(current_seq_file);
current_seq_file = open_seqfile(prefix,
current_seq_file = open_seqfile(current_prefix,
current_file_idx);
if (current_seq_file)
seq = readnext_ecoseq(current_seq_file);
}