Eric Coissac
e2ebc357ee
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/branches/ecoPrimers-2.1@298 60f365c0-8329-0410-b2a4-ec073aeeaa1d
16 lines
1.1 KiB
Plaintext
16 lines
1.1 KiB
Plaintext
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./ecoPrimer -d /Groups/Barcode-Leca/eubacteria-gr -l 10 -L 1000 -e 3 > euBactResults.txt
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./ecoPrimer -d ChloroDB/chloroplast -l 5 -L 120 -r 58023 -e 3 > chloroVascularPlantsEric.txt
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./ecoPrimer -d /Users/tiayyba/Documents/Data/mitochondrion/mitochondrion -q 0.4 -s 0.5 -l 10 -L 60 -r 1 -i 1 -T 0.2 -p > setsRoot.txt
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./ecoPCR -d /Users/tiayyba/Documents/workspace/ecoPrimers/src/mitochondrion/mitochondrion -l 50 -L 120 -r 7742 TAGAACAGGCTCCTCTAG TTAGATACCCCACTATGC > 12SV5.ecoPCR
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ecoTaxSpecificity -d /Users/tiayyba/Documents/workspace/ecoPrimers/src/mitochondrion/mitochondrion /Users/tiayyba/Documents/workspace/ecoPCR/src/12SV5.ecoPCR
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149 ./ecoPrimer -d /Users/tiayyba/Documents/Data/mitochondrion/mitochondrion -r 40674 -E 9606 -l 10 -L 100 > MamalsNotHomoSapien.primers
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150 ./ecoPrimer -d /Users/tiayyba/Documents/Data/mitochondrion/mitochondrion -q 0.4 -s 0.5 -r 40674 -E 9606 -l 10 -L 100 > MamalsNotHomoSapien.primers
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151 ./ecoPrimer -d /Users/tiayyba/Documents/Data/mitochondrion/mitochondrion -q 0.5 -s 0.6 -r 40674 -E 9606 -l 10 -L 100 > MamalsNotHomoSapien1.primers
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