Eric Coissac
f9410e5aee
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@175 60f365c0-8329-0410-b2a4-ec073aeeaa1d
32 lines
650 B
C
32 lines
650 B
C
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/**
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*
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* J Jr SantaLucia.
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* A uniÞed view of polymer, dumbbell, and oligonucleotide
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* dna nearest-neighbor thermodynamics.
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* Proc Natl Acad Sci U S A, 95(4):1460Ð1465, 1998 Feb 17.
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*/
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//Nearest-neighbor sequence
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//(5'-3'/5'-3') deltaH deltaS
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// kcal/mol cal/(moláK)
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//AA/TT -7.9 -22.2
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//AG/CT -7.8 -21.0
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//AT/AT -7.2 -20.4
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//AC/GT -8.4 -22.4
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//GA/TC -8.2 -22.2
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//GG/CC -8.0 -19.9
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//GC/GC -9.8 -24.4
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//TA/TA -7.2 -21.3
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//TG/CA -8.5 -22.7
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//CG/CG -10.6 -27.2
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//Terminal A-T base pair 2.3 4.1
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//Terminal G-C base pair 0.1 -2.8
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float nearestNeighborTm(const char *oligo,float probe,float target)
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{
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}
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