This commit is contained in:
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doc/sphinx/source/attributes/family.txt
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doc/sphinx/source/attributes/family.txt
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family
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An integer value corresponding to the family of the taxid stored into the
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:doc:`taxid <taxid>` attribute. If the family is not defined for this taxid,
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this value is *None*.
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.. warning:: This taxonomic information is just added to the sequence for the end-user
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convenience and not used by other ``obitool`` programs as taxonomic information.
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Only the taxonomic information included in the :doc:`taxid <../attributes/taxid>`
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attribute is used as taxonomic annotation.
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Attribute added by the programs:
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- :doc:`obiuniq <scripts/obiuniq>`
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- :doc:`obisample <../scripts/obisample>`
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doc/sphinx/source/attributes/family_name.txt
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doc/sphinx/source/attributes/family_name.txt
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family_name
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A string value indicating the family name of the taxid stored into the
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:doc:`taxid <attributes/taxid>`. If the family is not defined for this taxid,
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this value is *None*.
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.. warning:: This taxonomic information is just added to the sequence for the end-user
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convenience and not used by other ``obitool`` programs as taxonomic information.
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Only the taxonomic information included in the :doc:`taxid <../attributes/taxid>`
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attribute is used as taxonomic annotation.
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Attribute added by the programs:
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- :doc:`obiuniq <scripts/obiuniq>`
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- :doc:`obisample <../scripts/obisample>`
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doc/sphinx/source/attributes/genus.txt
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doc/sphinx/source/attributes/genus.txt
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genus
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An integer value corresponding to the genus of the taxid stored into the
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:doc:`taxid <taxid>` attribute. If the genus is not defined for this taxid,
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this value is *None*.
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.. warning:: This taxonomic information is just added to the sequence for the end-user
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convenience and not used by other ``obitool`` programs as taxonomic information.
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Only the taxonomic information included in the :doc:`taxid <../attributes/taxid>`
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attribute is used as taxonomic annotation.
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Attribute added by the programs:
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- :doc:`obiuniq <scripts/obiuniq>`
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- :doc:`obisample <../scripts/obisample>`
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doc/sphinx/source/attributes/genus_name.txt
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doc/sphinx/source/attributes/genus_name.txt
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genus_name
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A string value indicating the genus name of the taxid stored into the
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:doc:`taxid <attributes/taxid>`. If the genus is not defined for this taxid,
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this value is *None*.
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.. warning:: This taxonomic information is just added to the sequence for the end-user
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convenience and not used by other ``obitool`` programs as taxonomic information.
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Only the taxonomic information included in the :doc:`taxid <../attributes/taxid>`
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attribute is used as taxonomic annotation.
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Attribute added by the programs:
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- :doc:`obiuniq <scripts/obiuniq>`
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- :doc:`obisample <../scripts/obisample>`
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doc/sphinx/source/attributes/species.txt
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doc/sphinx/source/attributes/species.txt
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species
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An integer value corresponding to the species of the taxid stored into the
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:doc:`taxid <taxid>` attribute. If the species is not defined for this taxid,
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this value is *None*.
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.. warning:: This taxonomic information is just added to the sequence for the end-user
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convenience and not used by other ``obitool`` programs as taxonomic information.
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Only the taxonomic information included in the :doc:`taxid <../attributes/taxid>`
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attribute is used as taxonomic annotation.
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Attribute added by the programs:
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- :doc:`obiuniq <scripts/obiuniq>`
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- :doc:`obisample <../scripts/obisample>`
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doc/sphinx/source/attributes/species_name.txt
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doc/sphinx/source/attributes/species_name.txt
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species_name
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A string value indicating the species name of the taxid stored into the
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:doc:`taxid <attributes/taxid>`. If the species is not defined for this taxid,
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this value is *None*.
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.. warning:: This taxonomic information is just added to the sequence for the end-user
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convenience and not used by other ``obitool`` programs as taxonomic information.
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Only the taxonomic information included in the :doc:`taxid <../attributes/taxid>`
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attribute is used as taxonomic annotation.
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Attribute added by the programs:
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- :doc:`obiuniq <scripts/obiuniq>`
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- :doc:`obisample <../scripts/obisample>`
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