|
|
b26c3315b1
|
new version of fastaSample script
|
2010-05-10 11:35:40 +00:00 |
|
|
|
5913833228
|
new version of convert2fasta
|
2010-05-10 11:31:48 +00:00 |
|
|
|
c58270fb24
|
patch help of -d option in obitab
|
2010-05-10 11:14:58 +00:00 |
|
|
|
8d08d50bf2
|
Add --length option to obiannotate to replace the old fastalength script
|
2010-05-10 11:11:15 +00:00 |
|
|
|
6543f9bb1d
|
Change version number
|
2010-05-06 15:45:50 +00:00 |
|
|
|
a1d0207eca
|
new prelininary version of obistat script
|
2010-05-06 15:44:51 +00:00 |
|
|
|
f116965597
|
patch ngsfilter two allow one tag strategy
|
2010-05-06 15:44:11 +00:00 |
|
|
|
c067cb99f2
|
switch fasta2tab to the new style script
|
2010-05-05 08:43:46 +00:00 |
|
|
|
29a9e26494
|
switch fastaAnnotate to the new style script
|
2010-05-05 08:24:35 +00:00 |
|
|
|
26c503edfc
|
Change version number
|
2010-05-05 05:47:00 +00:00 |
|
|
|
394c3237a1
|
switch fastaSplit to the new style script
|
2010-05-05 05:46:10 +00:00 |
|
|
|
393eabdd5c
|
Add automanagement of input and output format
|
2010-04-30 12:16:11 +00:00 |
|
|
|
94d68c8f91
|
Add automanagement of input and output format
|
2010-04-30 11:51:12 +00:00 |
|
|
|
f6a01e0e99
|
switch to not zip safe module mode
|
2010-04-29 16:02:20 +00:00 |
|
|
|
58e5756c2a
|
remove import of Cython.Shadow
|
2010-04-29 16:01:42 +00:00 |
|
|
|
c5e6ce437f
|
Change version number
|
2010-04-29 15:45:17 +00:00 |
|
|
|
7c3118f0ce
|
Add automanagement of input and output format
|
2010-04-29 15:43:30 +00:00 |
|
|
|
aa3347cbc6
|
remove accent in doc string
|
2010-04-29 15:41:50 +00:00 |
|
|
|
bed3d71014
|
Patch a bug in automanagement of input and output format
|
2010-04-29 15:40:48 +00:00 |
|
|
|
c44ba780b6
|
Change version number
|
2010-04-29 14:02:30 +00:00 |
|
|
|
cf4cc8a3e2
|
remove import of Cython.Shadow
|
2010-04-29 13:58:28 +00:00 |
|
|
|
8bf941840e
|
Take into account the new word api
|
2010-04-29 13:20:54 +00:00 |
|
|
|
e2d898d499
|
|
2010-04-29 13:20:00 +00:00 |
|
|
|
f33fa74756
|
simplify command names
|
2010-04-27 21:57:32 +00:00 |
|
|
|
0cafa5b349
|
Add automanagement of input and output format
|
2010-04-27 15:16:08 +00:00 |
|
|
|
4bd345c4d4
|
Add automanagement of input and output format
|
2010-04-27 15:15:05 +00:00 |
|
|
|
8a77bf46c7
|
New C version of pyx files
|
2010-04-27 15:13:47 +00:00 |
|
|
|
018ce968e6
|
Add automanagement of input and output format
|
2010-04-27 15:12:36 +00:00 |
|
|
|
8ef73843c1
|
Add automanagement of input and output format
|
2010-04-27 15:11:52 +00:00 |
|
|
|
96a3b0ba00
|
Add management of quality scores
|
2010-04-01 20:01:02 +00:00 |
|
|
|
5a45fae59b
|
Switch to Cython 0.12.1
|
2010-04-01 20:00:11 +00:00 |
|
|
|
09a81cb02f
|
Add an error position iterator class
|
2010-04-01 19:59:32 +00:00 |
|
|
|
75fd1917c7
|
Add management of quality scores
|
2010-04-01 19:55:20 +00:00 |
|
|
|
003a7425b9
|
add fastq and qual file management options
|
2010-04-01 19:54:18 +00:00 |
|
|
|
f55a98a548
|
Adapt quality sequence to the standard sequence API
|
2010-04-01 19:49:51 +00:00 |
|
|
|
dbbccf9a8d
|
Switch to Cython 0.12.1
|
2010-04-01 10:09:08 +00:00 |
|
|
|
f83f71eb86
|
Some refactoring details on alignment to switch to Cython 0.12.1
|
2010-04-01 10:06:53 +00:00 |
|
|
|
1d0af91d1b
|
Add a manifest template indicating to setup.py to include .pxd, .pyx and .c files in the source distribution.
|
2010-04-01 09:52:12 +00:00 |
|
|
|
e31b47a30c
|
modify the install script function to suppress the .py at the end of the command name. So now, fastaGrep.py becomes fastaGrep
|
2010-04-01 09:50:18 +00:00 |
|
|
|
16e1992cdc
|
patch of the progress bar printing
|
2010-03-09 17:04:05 +00:00 |
|
|
|
cd7f45f926
|
change unsigned long long to unsigned long
|
2010-03-02 14:44:11 +00:00 |
|
|
|
e3997fd4d5
|
patch alignSequence function for compatibility with Cython 0.12.1
|
2010-03-02 14:23:58 +00:00 |
|
|
|
83c315db99
|
add an internal implementation of bin function (bin2str) that is appeared
only in python 2.6
|
2010-03-02 14:14:03 +00:00 |
|
|
|
30d834cdc3
|
Add a -p option to fastaUniq to merge sequences on their prefix identity
|
2010-02-25 11:17:05 +00:00 |
|
|
|
37d6943c3c
|
change dequeue usage to match older api
|
2010-02-24 17:01:54 +00:00 |
|
|
|
7e76188c8e
|
patch setup.py to take into account new version (0.12) of cython
|
2010-02-24 17:00:29 +00:00 |
|
|
|
22e0a05825
|
add a -i option to fastaUniq script
|
2010-01-26 10:18:33 +00:00 |
|
|
|
fcb1e451d6
|
add a -i option to fastaUniq script
|
2010-01-26 10:16:31 +00:00 |
|
|
|
088134fd32
|
add a -i option to fastaUniq script
|
2010-01-26 10:15:35 +00:00 |
|
|
|
5104a73204
|
add a -i option to fastaUniq script
|
2010-01-26 10:13:32 +00:00 |
|
