26 lines
1.0 KiB
Bash
26 lines
1.0 KiB
Bash
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_obi_comp ()
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{
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local cur prev
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cur="${COMP_WORDS[COMP_CWORD]}"
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prev="${COMP_WORDS[COMP_CWORD-1]}"
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if [ "${#COMP_WORDS[@]}" = "2" ]; then
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COMPREPLY=($(compgen -W "align alignpairedend annotate build_ref_db clean_dms clean count ecopcr ecotag export grep head history import less ls ngsfilter sort stats tail test uniq" "${COMP_WORDS[1]}"))
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else
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if [[ "$cur" == *VIEWS* ]]; then
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COMPREPLY=($(compgen -o plusdirs -f -X '!*.obiview' -- "${COMP_WORDS[COMP_CWORD]}"))
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elif [[ -d $cur.obidms ]]; then
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COMPREPLY=($(compgen -o plusdirs -f $cur.obidms/VIEWS/ -- "${COMP_WORDS[COMP_CWORD]}"), $(compgen -o plusdirs -f -X '!*.obidms/' -- "${COMP_WORDS[COMP_CWORD]}"))
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elif [[ "$cur" == *obidms* ]]; then
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COMPREPLY=($(compgen -o plusdirs -f $cur/VIEWS/ -- "${COMP_WORDS[COMP_CWORD]}"))
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else
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COMPREPLY=($(compgen -o plusdirs -f -X '!*.obidms/' -- "${COMP_WORDS[COMP_CWORD]}"))
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fi
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if [[ "$prev" == import ]]; then
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COMPREPLY+=($(compgen -f -- "${COMP_WORDS[COMP_CWORD]}"))
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fi
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fi
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}
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complete -o nospace -F _obi_comp obi
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