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obitools3/src/obidmscolumndir.c

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/****************************************************************************
* OBIDMS column directories functions *
****************************************************************************/
/**
* @file obidmscolumndir.c
* @author Celine Mercier
* @date 18 June 2015
* @brief Functions for OBIDMS column directories.
*/
#include <stdlib.h>
#include <stdio.h>
#include <sys/types.h>
#include <dirent.h>
#include <fcntl.h>
#include <unistd.h>
#include "obidmscolumndir.h"
#include "obidms.h"
#include "private_at_functions.h"
#include "obierrno.h"
/**************************************************************************
*
* D E C L A R A T I O N O F T H E P R I V A T E F U N C T I O N S
*
**************************************************************************/
/**
* Internal function building the column directory name from an OBIDMS column name.
*
* The function builds the directory name corresponding to an OBIDMS column directory.
* It checks also that the name is not too long.
*
* @warning The returned pointer has to be freed by the caller.
*
* @param column_name the name of the OBIDMS column
*
* @return a pointer to the OBIDMS column directory name
* @retvalue <column_directory_name> if everything is ok
* @retvalue NULL if an error occurs
*
* ###Error values
* - OBIDMS_MEMORY_ERROR : something wrong occurred during memory allocation.
* - OBIDMS_LONG_NAME_ERROR : the database name exceeds the limit.
*
* @since June 2015
* @author Celine Mercier (celine.mercier@metabarcoding.org)
*/
static char* build_column_directory_name(const char* column_name);
/************************************************************************
*
* D E F I N I T I O N O F T H E P R I V A T E F U N C T I O N S
*
************************************************************************/
static char* build_column_directory_name(const char* column_name)
{
char* column_directory_name;
// Build the database directory name
if (asprintf(&column_directory_name, "%s.obicol", column_name) < 0)
{
obi_set_errno(OBICOLDIR_MEMORY_ERROR);
return NULL;
}
// Test if the database name is not too long
if (strlen(column_directory_name) >= OBIDMS_COLUMN_DIR_MAX_NAME)
{
obi_set_errno(OBICOLDIR_LONG_NAME_ERROR);
free(column_directory_name);
return NULL;
}
return column_directory_name;
}
/**********************************************************************
*
* D E F I N I T I O N O F T H E P U B L I C F U N C T I O N S
*
**********************************************************************/
int obi_column_directory_exists(OBIDMS_p dms, const char* column_name)
{
struct stat buffer;
char* column_directory_name;
char* full_path;
int check_dir;
int dms_file_descriptor;
// Build and check the directory name
column_directory_name = build_column_directory_name(column_name);
if (column_directory_name == NULL)
{
obi_set_errno(OBICOLDIR_UNKNOWN_ERROR);
return -1;
}
// Get the file descriptor for the dms
dms_file_descriptor = dirfd(dms->directory);
if (dms_file_descriptor < 0)
{
obi_set_errno(OBIDMS_UNKNOWN_ERROR);
free(column_directory_name);
return -1;
}
// Get the full path for the column directory
full_path = get_full_path(dms_file_descriptor, column_directory_name);
if (full_path == NULL)
{
obi_set_errno(OBICOLDIR_UNKNOWN_ERROR);
free(column_directory_name);
return -1;
}
check_dir = stat(full_path, &buffer);
free(column_directory_name);
free(full_path);
if(check_dir == 0)
return 1;
else
return 0;
}
OBIDMS_column_directory_p obi_create_column_directory(OBIDMS_p dms, const char* column_name)
{
char* column_directory_name;
int dms_file_descriptor;
// Build and check the directory name
column_directory_name = build_column_directory_name(column_name);
if (column_directory_name == NULL)
{
obi_set_errno(OBICOLDIR_UNKNOWN_ERROR);
return NULL;
}
// Get the file descriptor for the dms
dms_file_descriptor = dirfd(dms->directory);
if (dms_file_descriptor < 0)
{
obi_set_errno(OBIDMS_UNKNOWN_ERROR);
free(column_directory_name);
return NULL;
}
// Try to create the directory
if (private_mkdirat(dms_file_descriptor, column_directory_name, 0x777) < 0)
{
if (errno == EEXIST)
obi_set_errno(OBICOLDIR_EXIST_ERROR);
else
obi_set_errno(OBICOLDIR_UNKNOWN_ERROR);
free(column_directory_name);
close(dms_file_descriptor);
return NULL;
}
free(column_directory_name);
return obi_open_column_directory(dms, column_name);
}
OBIDMS_column_directory_p obi_open_column_directory(OBIDMS_p dms, const char* column_name)
{
OBIDMS_column_directory_p column_directory;
char* column_directory_name;
DIR* directory;
int dms_file_descriptor;
column_directory = NULL;
// Build and check the directory name
column_directory_name = build_column_directory_name(column_name);
if (column_directory_name == NULL)
return NULL;
// Get the file descriptor for the dms
dms_file_descriptor = dirfd(dms->directory);
if (dms_file_descriptor < 0)
{
obi_set_errno(OBIDMS_UNKNOWN_ERROR);
free(column_directory_name);
return NULL;
}
// Try to open the column directory
directory = private_opendirat(dms_file_descriptor, column_directory_name);
if (directory == NULL) {
switch (errno)
{
case ENOENT:
obi_set_errno(OBICOLDIR_NOT_EXIST_ERROR);
break;
case EACCES:
obi_set_errno(OBICOLDIR_ACCESS_ERROR);
break;
case ENOMEM:
obi_set_errno(OBICOLDIR_MEMORY_ERROR);
break;
default:
obi_set_errno(OBICOLDIR_UNKNOWN_ERROR);
}
free(column_directory_name);
close(dms_file_descriptor);
return NULL;
}
// Allocate the column dir structure
column_directory = (OBIDMS_column_directory_p) malloc(sizeof(OBIDMS_column_directory_t));
if (column_directory == NULL)
{
obi_set_errno(OBICOLDIR_MEMORY_ERROR);
free(column_directory_name);
close(dms_file_descriptor);
return NULL;
}
// Initialize the data structure
strcpy(column_directory->directory_name, column_directory_name);
strcpy(column_directory->column_name, column_name);
column_directory->directory = directory;
free(column_directory_name);
return column_directory;
}
OBIDMS_column_directory_p obi_column_directory(OBIDMS_p dms, const char* column_name)
{
int exists;
exists = obi_column_directory_exists(dms, column_name);
switch (exists)
{
case 0:
return obi_create_column_directory(dms, column_name);
case 1:
return obi_open_column_directory(dms, column_name);
};
return NULL;
}
int obi_close_column_directory(OBIDMS_column_directory_p column_directory)
{
if (column_directory != NULL)
{
// Close the column directory
if (closedir(column_directory->directory) < 0)
{
obi_set_errno(OBICOLDIR_MEMORY_ERROR);
free(column_directory);
return -1;
}
free(column_directory);
}
return 0;
}