Better detection of missing taxonomy

2019-08-29 16:10:09 +02:00
parent dcf8cf1d64
commit 187053026f
4 changed files with 4 additions and 4 deletions
--- a/python/obitools3/commands/stats.pyx
+++ b/python/obitools3/commands/stats.pyx
@ -146,7 +146,7 @@ def run(config):

    if 'taxoURI' in config['obi'] and config['obi']['taxoURI'] is not None:
        taxo_uri = open_uri(config['obi']['taxoURI'])
-        if taxo_uri is None:
+        if taxo_uri is None or taxo_uri[2] == bytes:
            raise Exception("Couldn't open taxonomy")
        taxo = taxo_uri[1]
    else :