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Changed sequence 'description' to 'definition' everywhere

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This commit is contained in:
Celine Mercier
2016-04-15 16:31:43 +02:00
parent 094b2371e9
commit 2aafecc3b5
10 changed files with 30 additions and 30 deletions
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2
src/obidms.c
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@ -577,7 +577,7 @@ int obi_dms_unlist_indexer(OBIDMS_p dms, Obi_indexer_p indexer)
for (i=0; i < indexers_list->nb_opened_indexers; i++)
{
if (!strcmp(((indexers_list->indexers)[i])->name, indexer->name)) // TODO it references something in AVL_group struct
if (!strcmp(((indexers_list->indexers)[i])->name, indexer->name)) // TODO get_name function indexer
{ // Found the indexer. Rearrange list
(indexers_list->nb_opened_indexers)--;
(indexers_list->indexers)[i] = (indexers_list->indexers)[indexers_list->nb_opened_indexers];

2
src/obidms.h
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@ -42,7 +42,7 @@
*/
typedef int32_t obiversion_t; /**< TODO double
typedef int32_t obiversion_t; /**< TODO put dans obitypes.h
*/

2
src/obidmscolumn.c
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@ -558,7 +558,7 @@ OBIDMS_column_p obi_create_column(OBIDMS_p dms,
if (((data_type == OBI_STR) || (data_type == OBI_SEQ)) && (strcmp(indexer_name, "") == 0))
{ // TODO make function in obiblob_indexer.c and discuss the fact that it's here
strcpy(final_indexer_name, column_name);
strcat(final_indexer_name, "_indexer");
strcat(final_indexer_name, "_indexer"); // TODO _version_indexer
}
else
strcpy(final_indexer_name, indexer_name);

4
src/obiview.c
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@ -310,8 +310,8 @@ Obiview_p obi_new_view_nuc_seqs(OBIDMS_p dms, const char* view_name, Obiview_p v
obidebug(1, "Error adding an obligatory column in a nucleotide sequences view");
return NULL;
}
// Adding description column
if (obi_view_add_column(view, DESCRIPTION_COLUMN, -1, OBI_STR, 0, 1, DESCRIPTION_COLUMN, DESCRIPTION_INDEXER, "Descriptions", true) < 0)
// Adding definition column
if (obi_view_add_column(view, DEFINITION_COLUMN, -1, OBI_STR, 0, 1, DEFINITION_COLUMN, DEFINITION_INDEXER, "Definitions", true) < 0)
{
obidebug(1, "Error adding an obligatory column in a nucleotide sequences view");
return NULL;

4
src/obiview.h
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@ -42,8 +42,8 @@
#define ID_COLUMN "ID"
#define ID_INDEXER "ID_INDEXER"
#define DESCRIPTION_COLUMN "DESCRIPTION"
#define DESCRIPTION_INDEXER "DESCRIPTION_INDEXER"
#define DEFINITION_COLUMN "DEFINITION"
#define DEFINITION_INDEXER "DEFINITION_INDEXER"
#define LINES_COLUMN_NAME "LINES"