Comment the install of the packages

setup.py

@@ -4,9 +4,11 @@ import sys
 import re
 import subprocess
 
-from distutils.core import setup,Extension
+from distutils import log
+from distutils.core import setup
+    
+from distutils.core import Extension
 from distutils.sysconfig import get_python_lib
-from Cython.Build import cythonize
 
 import os.path
 from distutils import log
@@ -14,9 +16,6 @@ from distutils.extension import Extension
 
 sys.path.append(os.path.abspath("python"))
 
-dependencies = ['sphinx',"Cython"]
-
-
 def findPackage(root,base=None):
     modules=[]
     if base is None:
@@ -28,6 +27,7 @@ def findPackage(root,base=None):
     return modules
 
 def RunMake():
+    log.info("Build the build/cobject directory")
     try:
         os.mkdir("build")
     except OSError:
@@ -40,16 +40,23 @@ def RunMake():
     oldwd = os.getcwd()
     os.chdir("build/cobject")
     install_clibdir_option="-DPYTHONLIB:STRING='%s'" % get_python_lib()
+    log.info("Run CMake")
     subprocess.call(['cmake', install_clibdir_option, '../../src'])
+    log.info("Compile the shared C library")
     subprocess.call(['make','install'])   # temporary fix but should be in src
     os.chdir(oldwd)
-    
+ 
+#def install_dependencies(deps):
+#    for r in deps:
+#         log.info("Installing dependency : %s" %r)
+#         subprocess.call(['pip','install',r])
+                          
 
 PACKAGE     = "OBITools3"
-VERSION     = "0.0.0"
+VERSION     = "0.0.6"
 AUTHOR      = 'Eric Coissac'
 EMAIL       = 'eric@metabarcoding.org'
-URL         = "metabarcoding.org/obitools3"
+URL         = "http://metabarcoding.org/obitools3"
 LICENSE     = "CeCILL-V2"
 DESCRIPTION = "Tools and library for DNA metabarcoding",
 PYTHONMIN   = '3.7'
@@ -65,9 +72,11 @@ REQUIRES  = ['Cython>=0.24',
 
 os.environ['CFLAGS'] = '-O3 -Wall -I "src" -I "src/libecoPCR" -I "src/libjson"'
 
-
+#install_dependencies(REQUIRES)
 RunMake()
 
+from Cython.Build import cythonize
+
 cython_src  = [x for x in glob.iglob('python/obitools3/**/*.pyx', 
                                      recursive=True
                                     )