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More optimized Column item getter

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This commit is contained in:
Celine Mercier
2017-07-05 17:37:19 +02:00
parent 5ee0b3989a
commit 3bbc2ae469
1 changed files with 7 additions and 4 deletions
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11
python/obitools3/dms/view/typed_view/view_NUC_SEQS.pyx
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@ -57,12 +57,13 @@ cdef class View_NUC_SEQS(View):
return view return view
# TODO
def __getitem__(self, object item) : def __getitem__(self, object item) :
if type(item) == str : if type(item) == int :
return self.get_column(item) # TODO hyper lent dans la pratique
elif type(item) == int :
return Nuc_Seq_Stored(self, item) return Nuc_Seq_Stored(self, item)
else : # TODO assume str or bytes for optimization?
return self.get_column(item) # TODO hyper lent dans la pratique
def __setitem__(self, index_t line_idx, Nuc_Seq sequence_obj) : def __setitem__(self, index_t line_idx, Nuc_Seq sequence_obj) :
@ -70,6 +71,8 @@ cdef class View_NUC_SEQS(View):
self[line_idx][key] = sequence_obj[key] self[line_idx][key] = sequence_obj[key]
# TODO make properties for id, seq, def columns etc
def register_class() : def register_class() :
register_view_class(VIEW_TYPE_NUC_SEQS, View_NUC_SEQS) register_view_class(VIEW_TYPE_NUC_SEQS, View_NUC_SEQS)