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Removed the predicate to check for a quality column (because for example

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with obi annotate, clone view so clone predicate, then modify seq, so
quality is deleted, and predicate becomes a problem)
This commit is contained in:
Celine Mercier
2018-03-21 16:37:19 +01:00
parent 4a815785c4
commit 4c3478d8f8
1 changed files with 6 additions and 6 deletions
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12
src/obiview.c
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@ -1900,10 +1900,10 @@ Obiview_p obi_new_view_nuc_seqs(OBIDMS_p dms, const char* view_name, Obiview_p v
// Add predicate functions specific to the view type // Add predicate functions specific to the view type
// TODO macros? // TODO macros?
if (quality_column) // if (quality_column) TODO
nb_predicates = view->nb_predicates + 4; // nb_predicates = view->nb_predicates + 4;
else // else
nb_predicates = view->nb_predicates + 3; nb_predicates = view->nb_predicates + 3;
if (view->nb_predicates == 0) if (view->nb_predicates == 0)
view->predicate_functions = malloc(nb_predicates * sizeof(char* (*) (Obiview_p))); view->predicate_functions = malloc(nb_predicates * sizeof(char* (*) (Obiview_p)));
@ -1920,8 +1920,8 @@ Obiview_p obi_new_view_nuc_seqs(OBIDMS_p dms, const char* view_name, Obiview_p v
(view->predicate_functions)[(view->nb_predicates)] = view_has_nuc_sequence_column; (view->predicate_functions)[(view->nb_predicates)] = view_has_nuc_sequence_column;
(view->predicate_functions)[(view->nb_predicates) + 1] = view_has_id_column; (view->predicate_functions)[(view->nb_predicates) + 1] = view_has_id_column;
(view->predicate_functions)[(view->nb_predicates) + 2] = view_has_definition_column; (view->predicate_functions)[(view->nb_predicates) + 2] = view_has_definition_column;
if (quality_column) // if (quality_column) # TODO discuss. Commented bc for example with obi annotate, clone view so clone predicate, then modify seq, so quality is deleted, and predicate boom
(view->predicate_functions)[(view->nb_predicates) + 3] = view_has_quality_column; // (view->predicate_functions)[(view->nb_predicates) + 3] = view_has_quality_column;
view->nb_predicates = nb_predicates; view->nb_predicates = nb_predicates;