ngsfilter: made more robust and practical to use with empty tags

2019-11-29 15:21:08 +01:00
parent 8bc249b2f4
commit 53f18316b0
3 changed files with 52 additions and 40 deletions
--- a/python/obitools3/apps/optiongroups/init.py
+++ b/python/obitools3/apps/optiongroups/init.py
@ -55,7 +55,7 @@ def __addImportInputOption(optionManager):
                     action="store_const", dest="obi:inputformat",
                     default=None,
                     const=b'ngsfilter',
-                     help="Input file is an ngsfilter file")
+                     help="Input file is an ngsfilter file. If not using tags, use ':' or 'None:None' or '-:-' or any combination")

    group.add_argument('--ecopcr-result-input',
                     action="store_const", dest="obi:inputformat",