Embryo of code for openMP parallelization of LCS alignment but

deactivated for now because can't make it compile with cython/clang
2016-12-20 11:46:58 +01:00
parent 9c71b06117
commit 5c50e5b378
3 changed files with 27 additions and 6 deletions
--- a/src/obi_align.h
+++ b/src/obi_align.h
@ -92,7 +92,8 @@ int obi_lcs_align_one_column(OBIDMS_p dms,
 							 const char* id_column_name,
 					         const char* output_view_name, const char* output_view_comments,
 							 bool print_seq, bool print_count,
-						     double threshold, bool normalize, int reference, bool similarity_mode);
+						     double threshold, bool normalize, int reference, bool similarity_mode,
+							 int thread_count);


 /**