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Files and functions for columns with the data type OBIChar_t, working

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but using char* (needs to be changed)
This commit is contained in:
Celine Mercier
2015-08-26 10:31:56 +02:00
parent 9ad31fddff
commit 611699252e
7 changed files with 159 additions and 7 deletions
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14
python/obitools3/obidms/obidmscolumn/capidmscolumn.pyx
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@ -4,7 +4,7 @@ from .capidmscolumn cimport *
from obitools3.obidms.obidmscolumn.obidmscolumn_int.capidmscolumn_int import OBIDMS_column_int
from obitools3.obidms.obidmscolumn.obidmscolumn_float.capidmscolumn_float import OBIDMS_column_float
from obitools3.obidms.obidmscolumn.obidmscolumn_bool.capidmscolumn_bool import OBIDMS_column_bool
#from obitools3.obidms.obidmscolumn.obidmscolumn_char.capidmscolumn_char import OBIDMS_column_char
from obitools3.obidms.obidmscolumn.obidmscolumn_char.capidmscolumn_char import OBIDMS_column_char
from obitools3.obidms.obidmscolumn.obidmscolumn_idx.capidmscolumn_idx import OBIDMS_column_idx
@ -112,12 +112,12 @@ cdef class OBIDMS_column:
nb_elements, nb_elements_per_line,
elements_names)
# elif type == 4 :
# column = OBIDMS_column_char(dms_name, column_name,
# create, clone, clone_data,
# version_number, type,
# nb_elements, nb_elements_per_line,
# elements_names)
elif type == 4 :
column = OBIDMS_column_char(dms_name, column_name,
create, clone, clone_data,
version_number, type,
nb_elements, nb_elements_per_line,
elements_names)
elif type == 5 :
column = OBIDMS_column_idx(dms_name, column_name,

0
python/obitools3/obidms/obidmscolumn/obidmscolumn_char/__init__.py Normal file
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16
python/obitools3/obidms/obidmscolumn/obidmscolumn_char/capidmscolumn_char.cfiles Normal file
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@ -0,0 +1,16 @@
../../../../../src/obidmscolumn_char.c
../../../../../src/obidmscolumn_char.h
../../../../../src/obidmscolumn.h
../../../../../src/obidmscolumn.c
../../../../../src/obidmscolumndir.h
../../../../../src/obidmscolumndir.c
../../../../../src/obidms.h
../../../../../src/obidms.c
../../../../../src/obierrno.h
../../../../../src/obierrno.c
../../../../../src/obilittlebigman.h
../../../../../src/obilittlebigman.c
../../../../../src/obitypes.h
../../../../../src/obitypes.c
../../../../../src/private_at_functions.h
../../../../../src/private_at_functions.c

7
python/obitools3/obidms/obidmscolumn/obidmscolumn_char/capidmscolumn_char.pxd Normal file
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@ -0,0 +1,7 @@
from obitools3.obidms.obidmscolumn.capidmscolumn cimport *
cdef extern from "obidmscolumn_char.h" nogil:
int obi_column_set_char(OBIDMS_column_p column, size_t line_nb, size_t element_idx, obichar_t* value)
obichar_t* obi_column_get_char(OBIDMS_column_p column, size_t line_nb, size_t element_idx)

30
python/obitools3/obidms/obidmscolumn/obidmscolumn_char/capidmscolumn_char.pyx Normal file
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@ -0,0 +1,30 @@
#cython: language_level=3
from .capidmscolumn_char cimport *
cdef class OBIDMS_column_char(OBIDMS_column) :
def set_item(self, line_nb, element_name, value):
if element_name != "" :
element_idx = self.get_element_index_from_name(element_name)
else :
if obi_column_get_nb_elements_per_line(self.pointer) == 1 :
element_idx = 0
else :
print("An element name must be specified")
return -1
return obi_column_set_char(self.pointer, line_nb, element_idx, value)
def get_item(self, line_nb, element_name):
if element_name != "" :
element_idx = self.get_element_index_from_name(element_name)
else :
if obi_column_get_nb_elements_per_line(self.pointer) == 1 :
element_idx = 0
else :
print("An element name must be specified")
return -1
return (obi_column_get_char(self.pointer, line_nb, element_idx)).decode(encoding='UTF-8')[:1] #not ideal...