obi clean: first version

python/obitools3/dms/capi/obiclean.pxd

@@ -0,0 +1,17 @@
+#cython: language_level=3
+
+from obitools3.dms.capi.obidms       cimport OBIDMS_p
+
+
+cdef extern from "obi_clean.h" nogil:
+
+    int obi_clean(const char* dms_name,
+                  const char* i_view_name,
+                  const char* sample_column_name,
+                  const char* o_view_name,
+                  const char* o_view_comments,
+                  double threshold,
+                  double max_ratio,
+                  bint heads_only,
+                  int thread_count)
+    

python/obitools3/dms/dms.cfiles

@@ -8,6 +8,7 @@
 ../../../src/linked_list.c
 ../../../src/murmurhash2.c
 ../../../src/obi_align.c
+../../../src/obi_clean.c
 ../../../src/obiavl.c
 ../../../src/obiblob_indexer.c
 ../../../src/obiblob.c