Updated the doc with the idea of OBIDMS release files.
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@ -9,6 +9,7 @@ The OBItools3 Data Management System (OBIDMS)
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An OBIDMS directory consists of :
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An OBIDMS directory consists of :
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* OBIDMS column files
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* OBIDMS column files
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* OBIDMS release files
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* an OBIDMS history file
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* an OBIDMS history file
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@ -56,12 +57,15 @@ A column of data of the same type.
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Versioning
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Versioning
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----------
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----------
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Since OBIDMS column files are read-only, any modification leads to the creation of a new version
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OBIDMS column files are read-only, and any modification leads to the creation of a new version
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of the column file.
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of the column file. That means that one column is stored in one file (if there is only one version)
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or more (if there are several versions), and that there is one file per version.
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The first version of a column file is numbered 1, and each new version increments that
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The first version of a column file is numbered 1, and each new version increments that
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number by 1.
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number by 1.
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The number of the latest version of an OBIDMS column is stored in an `OBIDMS release file <formats.html#obidms-release-files>`_.
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Mandatory columns
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Mandatory columns
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-----------------
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-----------------
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@ -69,7 +73,22 @@ Mandatory columns
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Some columns must exist in an OBIDMS directory :
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Some columns must exist in an OBIDMS directory :
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* sequence identifiers column
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* sequence identifiers column
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OBIDMS release files
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====================
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Each OBIDMS column is associated with an OBIDMS release file that contains the number of the latest
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version of the column.
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File name
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---------
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OBIDMS release files are named with the attribute associated to the data contained in the column, and
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have the extension ``.odr``.
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Example : ``count.odr``
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OBIDMS history file
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OBIDMS history file
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===================
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===================
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