Added the kmer filter to LCS alignments, and now obiblobs containing

encoded sequences are directly put in int16_t arrays for the alignment
2016-11-18 16:29:28 +01:00
parent 08e67a090f
commit 70c49e214a
17 changed files with 653 additions and 94 deletions
--- a/src/obi_align.h
+++ b/src/obi_align.h
@ -19,6 +19,7 @@
 #include <stdbool.h>

 #include "obidms.h"
+#include "obiview.h"
 #include "obidmscolumn.h"
 #include "obitypes.h"