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Added functions to clone views with a simpler API

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This commit is contained in:
Celine Mercier
2017-04-21 11:58:15 +02:00
parent 1725b8b80c
commit 71b1a43df8
2 changed files with 93 additions and 6 deletions
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47
src/obiview.h
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@ -227,7 +227,6 @@ Obiview_p obi_new_view_nuc_seqs(OBIDMS_p dms, const char* view_name, Obiview_p v
* @param line_selection Eventually a pointer on a list of indexes corresponding to a line selection to use with the view to clone
* if there is one. NULL if there is no line selection or no view to clone.
* @param comments Eventually, comments to associate with the view. NULL if not.
* @param quality_column Whether or not a sequence quality column is associated with the view.
*
* @returns A pointer to the newly created view structure.
* @retval NULL if an error occurred.
@ -235,7 +234,51 @@ Obiview_p obi_new_view_nuc_seqs(OBIDMS_p dms, const char* view_name, Obiview_p v
* @since February 2016
* @author Celine Mercier (celine.mercier@metabarcoding.org)
*/
Obiview_p obi_new_view_nuc_seqs_cloned_from_name(OBIDMS_p dms, const char* view_name, const char* view_to_clone_name, index_t* line_selection, const char* comments, bool quality_column);
Obiview_p obi_new_view_nuc_seqs_cloned_from_name(OBIDMS_p dms, const char* view_name, const char* view_to_clone_name, index_t* line_selection, const char* comments);
/**
* @brief Clones a view using a pointer on the view to clone.
*
* The new view has the same type as the cloned one.
* Fails if a view with the same name already exists.
*
* @param dms A pointer on the OBIDMS.
* @param view_to_clone A pointer on the opened view to clone to create the new one.
* @param view_name The unique name of the new view.
* @param line_selection Eventually a pointer on a list of indexes corresponding to a line selection to use with the view to clone
* if there is one. NULL if there is no line selection or no view to clone.
* @param comments Eventually, comments to associate with the view. NULL if not.
*
* @returns A pointer to the newly created view structure.
* @retval NULL if an error occurred.
*
* @since April 2017
* @author Celine Mercier (celine.mercier@metabarcoding.org)
*/
Obiview_p obi_clone_view(OBIDMS_p dms, Obiview_p view_to_clone, const char* view_name, index_t* line_selection, const char* comments);
/**
* @brief Clones a view using the name of the view to clone.
*
* The new view has the same type as the cloned one.
* Fails if a view with the same name already exists.
*
* @param dms A pointer on the OBIDMS.
* @param view_to_clone_name The name of the view to clone.
* @param view_name The unique name of the new view.
* @param line_selection Eventually a pointer on a list of indexes corresponding to a line selection to use with the view to clone
* if there is one. NULL if there is no line selection or no view to clone.
* @param comments Eventually, comments to associate with the view. NULL if not.
*
* @returns A pointer to the newly created view structure.
* @retval NULL if an error occurred.
*
* @since April 2017
* @author Celine Mercier (celine.mercier@metabarcoding.org)
*/
Obiview_p obi_clone_view_from_name(OBIDMS_p dms, const char* view_to_clone_name, const char* view_name, index_t* line_selection, const char* comments);
/**